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    Oryza meridionalis (Oryza_meridionalis_v1.3) ▼

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    Transcript: OMERI03G24800.1

    Location

    Chromosome 3: 26,030,133-26,033,006 reverse strand.

    About this transcript

    This transcript has 2 exons, is annotated with 27 domains and features and maps to 27 oligo probes.

    Gene

    This transcript is a product of gene OMERI03G24800 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtFlags
    -OMERI03G24800.12790828aa
     
    Protein coding
    		A0A0E0D461 Ensembl Canonical

    Domains & features

    Domains

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    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
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    Domain sourceStartEndDescriptionAccessionInterPro
    Superfamily1290-SSF57850-
    SMART136176ArmadilloSM00185IPR000225 [Display all genes with this domain]
    SMART178218ArmadilloSM00185IPR000225 [Display all genes with this domain]
    SMART263303ArmadilloSM00185IPR000225 [Display all genes with this domain]
    SMART304343ArmadilloSM00185IPR000225 [Display all genes with this domain]
    SMART344389ArmadilloSM00185IPR000225 [Display all genes with this domain]
    SMART455496ArmadilloSM00185IPR000225 [Display all genes with this domain]
    SMART598639ArmadilloSM00185IPR000225 [Display all genes with this domain]
    SMART686727ArmadilloSM00185IPR000225 [Display all genes with this domain]
    SMART732773ArmadilloSM00185IPR000225 [Display all genes with this domain]
    Gene3D108398Armadillo-like helical1.25.10.10IPR011989 [Display all genes with this domain]
    Gene3D408571Armadillo-like helical1.25.10.10IPR011989 [Display all genes with this domain]
    Gene3D588824Armadillo-like helical1.25.10.10IPR011989 [Display all genes with this domain]
    Superfamily114547Armadillo-type foldSSF48371IPR016024 [Display all genes with this domain]
    Superfamily471813Armadillo-type foldSSF48371IPR016024 [Display all genes with this domain]
    CDD1672PUB protein, U-box domain, plantcd16664IPR045210 [Display all genes with this domain]
    PROSITE profiles1392U-box domainPS51698IPR003613 [Display all genes with this domain]
    Pfam1690U-box domainPF04564IPR003613 [Display all genes with this domain]
    SMART1785U-box domainSM00504IPR003613 [Display all genes with this domain]
    PANTHER14823U-box domain-containing proteinPTHR45958IPR052608 [Display all genes with this domain]
    Gene3D299Zinc finger, RING/FYVE/PHD-type3.30.40.10IPR013083 [Display all genes with this domain]

    Other features

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    • Feature type
    • Start
    • End
    Download what you seeDownload whole table
    Feature typeStartEnd
    Seg103120
    Seg142153
    Seg400416
    Seg499514
    Seg663675
    Alphafold1828

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