Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OMERI03G11870.1

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Location

Chromosome 3: 10,448,849-10,459,713 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 19 domains and features and maps to 88 oligo probes.

Gene

This transcript is a product of gene OMERI03G11870 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OMERI03G11870.3	9362	305aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0CYV1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OMERI03G11870.1	9246	305aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0CYV1	-
-	OMERI03G11870.2	7575	238aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0CYV2	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Superfamily	36	75	-	SSF57850	-
Pfam	186	286	-	PF04641	-
Superfamily	203	261	-	SSF57850	-
PANTHER	1	301	Nitric oxide synthase-interacting protein	PTHR13063	IPR016818 [Display all genes with this domain]
PIRSF	2	292	Nitric oxide synthase-interacting protein	PIRSF023577	IPR016818 [Display all genes with this domain]
Pfam	5	75	Nitric oxide synthase-interacting protein, zinc-finger	PF15906	IPR031790 [Display all genes with this domain]
SMART	43	73	Zinc finger, RING-type	SM00184	IPR001841 [Display all genes with this domain]
SMART	214	255	Zinc finger, RING-type	SM00184	IPR001841 [Display all genes with this domain]
PROSITE profiles	214	256	Zinc finger, RING-type	PS50089	IPR001841 [Display all genes with this domain]
Gene3D	16	131	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]
Gene3D	174	281	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
Seg	81	99
Alphafold	1	305
Alphafold	1	305
Alphafold	1	305
Alphafold	1	305
Alphafold	1	305
Alphafold	1	305
Ncoils	68	108

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