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    Transcript: OMERI01G40810.1

    Location

    Chromosome 1: 40,493,894-40,501,098 reverse strand.

    About this transcript

    This transcript has 17 exons, is annotated with 44 domains and features and maps to 49 oligo probes.

    Gene

    This transcript is a product of gene OMERI01G40810 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtFlags
    -OMERI01G40810.13043693aa
     
    Protein coding
    		A0A0E0CD01 Ensembl Canonical

    Domains & features

    Domains

    Show/hide columns
    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
    Download what you seeDownload whole table
    Domain sourceStartEndDescriptionAccessionInterPro
    CDD151412-cd00200-
    PROSITE profiles189221-PS50294-
    PROSITE profiles231263-PS50294-
    PROSITE profiles295330-PS50294-
    PROSITE profiles337369-PS50294-
    PROSITE profiles381412-PS50294-
    PANTHER47679Pre-mRNA 3' end processing protein Pfs2-likePTHR22836IPR045245 [Display all genes with this domain]
    SMART135179WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    PROSITE profiles147179WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART182221WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam187220WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles189221WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART223263WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    PROSITE profiles231272WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    Pfam232263WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles273294WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART288327WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam290327WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles295336WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART330370WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam333369WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles337369WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART373413WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    PROSITE profiles381412WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    Pfam382412WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    Superfamily145416WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
    Gene3D135269WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
    Gene3D270422WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

    Other features

    Show/hide columns
    • Feature type
    • Start
    • End
    Download what you seeDownload whole table
    Feature typeStartEnd
    MobiDBLite138
    MobiDBLite166
    MobiDBLite511526
    MobiDBLite511531
    MobiDBLite649668
    MobiDBLite649693
    MobiDBLite674693
    Seg321
    Seg5967
    Seg493514
    Seg515543
    Seg556582
    Seg608625
    Seg647659
    Seg670692
    Alphafold1693

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