Oryza longistaminata (O_longistaminata_v1.0)
Location
About this transcript

This transcript has 1 exon, is annotated with 30 domains and features and maps to 20 oligo probes.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • Flags
NameTranscript IDbpProteinBiotypeFlags
-KN540047.1_FGT003918305aa
 
Protein coding
Ensembl Canonical

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
PROSITE profiles5185-PS50294-
PROSITE profiles209244-PS50294-
Prints7286G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
Prints182196G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
Prints232246G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
PANTHER4304Sec13/Seh1 familyPTHR11024IPR037363 [Display all genes with this domain]
SMART239WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam837WD40 repeatPF00400IPR001680 [Display all genes with this domain]
SMART4485WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam4684WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles5185WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART92133WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam95132WD40 repeatPF00400IPR001680 [Display all genes with this domain]
SMART139195WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam172194WD40 repeatPF00400IPR001680 [Display all genes with this domain]
SMART202245WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam208244WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles209244WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART251290WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Superfamily6290WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
Gene3D2305WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
Alphafold1305
Alphafold1305
Alphafold1305
Alphafold1305
Alphafold1305
Alphafold1305
Alphafold1305
Alphafold1305
Alphafold1305