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    Transcript: KN540030.1_FGT002

    Description

    SMU1 [Source:Projected from Arabidopsis thaliana (AT1G73720) UniProtKB/TrEMBL;Acc:A0A178WHG8]

    Location

    Scaffold KN540030.1: 1,780-8,655 forward strand.

    About this transcript

    This transcript has 15 exons, is annotated with 35 domains and features and maps to 44 oligo probes.

    Gene

    This transcript is a product of gene KN540030.1_FG002 Show transcript tableHide transcript table

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    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • Flags
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    NameTranscript IDbpProteinBiotypeFlags
    -KN540030.1_FGT0021599532aa
     
    Protein coding
    		Ensembl Canonical

    Domains & features

    Domains

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    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
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    Domain sourceStartEndDescriptionAccessionInterPro
    Pfam1141-PF17814-
    CDD223531-cd00200-
    PROSITE profiles264301-PS50294-
    PROSITE profiles349384-PS50294-
    PROSITE profiles499532-PS50294-
    PROSITE profiles4597CTLH, C-terminal LisH motifPS50897IPR006595 [Display all genes with this domain]
    SMART4597CTLH, C-terminal LisH motifSM00668IPR006595 [Display all genes with this domain]
    Prints233247G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints283297G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints368382G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    PROSITE profiles1143LIS1 homology motifPS50896IPR006594 [Display all genes with this domain]
    SMART1143LIS1 homology motifSM00667IPR006594 [Display all genes with this domain]
    SMART207246WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam223246WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles226255WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART257296WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    PROSITE profiles264305WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    Pfam266295WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    SMART299339WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam300337WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles307348WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART342381WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam343381WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles349390WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART405445WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART447489WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART492531WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam494530WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles499532WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    PROSITE patterns368382WD40 repeat, conserved sitePS00678IPR019775 [Display all genes with this domain]
    PANTHER6530WD40 repeat-containing protein SMU1PTHR22848IPR045184 [Display all genes with this domain]
    Superfamily211531WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
    Gene3D199404WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
    Gene3D405531WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

    Other features

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    • Feature type
    • Start
    • End
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    Feature typeStartEnd
    Ncoils7595

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