Ensembl Genomes HomeEnsembl Plants HomeEnsembl Plants Home ▼
More ▼
    Search »
    Oryza longistaminata (O_longistaminata_v1.0) ▼

    Favourite species

    All species

    Recent locations

    Transcript-based displays

    Configure this page

    Custom tracks

    Export data

    Bookmark this page

    Transcript: KN539808.1_FGT006

    Location

    Scaffold KN539808.1: 5,921-11,030 reverse strand.

    About this transcript

    This transcript has 9 exons, is annotated with 27 domains and features and maps to 36 oligo probes.

    Gene

    This transcript is a product of gene KN539808.1_FG006 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeFlags
    -KN539808.1_FGT0061584527aa
     
    Protein coding
    		Ensembl Canonical

    Domains & features

    Domains

    Show/hide columns
    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
    Download what you seeDownload whole table
    Domain sourceStartEndDescriptionAccessionInterPro
    PANTHER57210-PTHR13318-
    Superfamily58294-SSF52047-
    Superfamily270526-SSF52047-
    Pfam97119Leucine-rich repeatPF13516IPR001611 [Display all genes with this domain]
    Pfam381405Leucine-rich repeatPF13516IPR001611 [Display all genes with this domain]
    Pfam409430Leucine-rich repeatPF13516IPR001611 [Display all genes with this domain]
    Gene3D93294Leucine-rich repeat domain superfamily3.80.10.10IPR032675 [Display all genes with this domain]
    Gene3D295527Leucine-rich repeat domain superfamily3.80.10.10IPR032675 [Display all genes with this domain]
    SMART7297Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART98122Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART123148Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART150175Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART176200Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART226251Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART252277Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART278303Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART304329Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART330355Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART356381Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART382407Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART408432Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART433458Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART459484Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART485510Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]

    Other features

    Show/hide columns
    • Feature type
    • Start
    • End
    Download what you seeDownload whole table
    Feature typeStartEnd
    MobiDBLite2355
    Seg2335
    Seg513518

    This website requires cookies, and the limited processing of your personal data in order to function. By using the site you are agreeing to this as outlined in our Privacy Policy and Terms of Use

    I Agree