Oryza longistaminata (O_longistaminata_v1.0)
Location
About this transcript

This transcript has 15 exons, is annotated with 27 domains and features and maps to 20 oligo probes.

Gene
Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • Flags
NameTranscript IDbpProteinBiotypeFlags
-KN539612.1_FGT0041641546aa
 
Protein coding
Ensembl Canonical

Domains

Show/hide columns
  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
PROSITE profiles434469-PS50294-
Prints293307G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
Prints364378G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
Prints454468G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
PANTHER8354Glutamate-rich WD repeat-containingPTHR45903IPR051972 [Display all genes with this domain]
Pfam42108Histone-binding protein RBBP4, N-terminalPF12265IPR022052 [Display all genes with this domain]
SMART143187WD40 repeatSM00320IPR001680 [Display all genes with this domain]
SMART231271WD40 repeatSM00320IPR001680 [Display all genes with this domain]
SMART272306WD40 repeatSM00320IPR001680 [Display all genes with this domain]
PROSITE profiles285311WD40 repeatPS50082IPR001680 [Display all genes with this domain]
Pfam291306WD40 repeatPF00400IPR001680 [Display all genes with this domain]
SMART310350WD40 repeatSM00320IPR001680 [Display all genes with this domain]
SMART354377WD40 repeatSM00320IPR001680 [Display all genes with this domain]
PROSITE profiles354382WD40 repeatPS50082IPR001680 [Display all genes with this domain]
Pfam356377WD40 repeatPF00400IPR001680 [Display all genes with this domain]
SMART381421WD40 repeatSM00320IPR001680 [Display all genes with this domain]
SMART427467WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam430467WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles434476WD40 repeatPS50082IPR001680 [Display all genes with this domain]
Superfamily231528WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
Gene3D45352WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
Gene3D353541WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

Other features

Show/hide columns
  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite118143
MobiDBLite127141
Seg416
Seg122143
Seg474486