Oryza longistaminata (O_longistaminata_v1.0)
Location
About this transcript

This transcript has 18 exons, is annotated with 15 domains and features and maps to 25 oligo probes.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • Flags
NameTranscript IDbpProteinBiotypeFlags
-KN539261.1_FGT0162514837aa
 
Protein coding
Ensembl Canonical

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
Superfamily301379-SSF52058-
PANTHER463829-PTHR46116-
SMART588745-SM00212-
Gene3D240358Leucine-rich repeat domain superfamily3.80.10.10IPR032675 [Display all genes with this domain]
PROSITE profiles585745Ubiquitin-conjugating enzyme E2PS50127IPR000608 [Display all genes with this domain]
CDD587737Ubiquitin-conjugating enzyme E2cd00195IPR000608 [Display all genes with this domain]
Pfam589720Ubiquitin-conjugating enzyme E2PF00179IPR000608 [Display all genes with this domain]
Gene3D546823Ubiquitin-conjugating enzyme/RWD-like3.10.110.10IPR016135 [Display all genes with this domain]
Superfamily584754Ubiquitin-conjugating enzyme/RWD-likeSSF54495IPR016135 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
Seg213
Seg374383
Seg391403
TMHMM4466
TMHMM87109
Ncoils119139