Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: KN538920.1_FGT012

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Location

Scaffold KN538920.1: 92,848-103,297 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 16 domains and features and maps to 62 oligo probes.

Gene

This transcript is a product of gene KN538920.1_FG012 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	Flags
-	KN538920.1_FGT012	1932	643aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	261	367	-	2.30.30.140	-
Gene3D	368	424	-	3.30.60.60	-
Gene3D	426	638	-	3.40.630.30	-
CDD	479	537	-	cd04301	-
Superfamily	368	639	Acyl-CoA N-acyltransferase	SSF55729	IPR016181 [Display all genes with this domain]
Pfam	156	279	Amine oxidase	PF01593	IPR002937 [Display all genes with this domain]
Superfamily	269	368	Chromo-like domain superfamily	SSF54160	IPR016197 [Display all genes with this domain]
SMART	270	330	Chromo/chromo shadow domain	SM00298	IPR000953 [Display all genes with this domain]
Superfamily	2	196	FAD/NAD(P)-binding domain superfamily	SSF51905	IPR036188 [Display all genes with this domain]
PROSITE profiles	367	638	Histone acetyltransferase domain, MYST-type	PS51726	IPR002717 [Display all genes with this domain]
Pfam	428	605	Histone acetyltransferase domain, MYST-type	PF01853	IPR002717 [Display all genes with this domain]
PANTHER	266	640	MYST family histone acetyltransferases	PTHR10615	IPR050603 [Display all genes with this domain]
Pfam	369	423	MYST, zinc finger domain	PF17772	IPR040706 [Display all genes with this domain]
Pfam	268	315	RNA binding activity-knot of a chromodomain	PF11717	IPR025995 [Display all genes with this domain]
Gene3D	546	626	Winged helix-like DNA-binding domain superfamily	1.10.10.10	IPR036388 [Display all genes with this domain]

Other features

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