Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: KN538727.1_FGT074

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Location

Scaffold KN538727.1: 335,361-337,509 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 12 domains and features and maps to 15 oligo probes.

Gene

This transcript is a product of gene KN538727.1_FG074 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	Flags
-	KN538727.1_FGT074	1464	487aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
CDD	114	152	-	cd22157	-
Gene3D	115	152	-	1.20.1280.50	-
PANTHER	117	409	Arabidopsis thaliana F-box	PTHR47993	IPR050233 [Display all genes with this domain]
Pfam	314	445	F-box associated domain, type 1	PF07734	IPR006527 [Display all genes with this domain]
NCBIFAM	216	430	F-box associated interaction domain	TIGR01640	IPR017451 [Display all genes with this domain]
TIGRFAM	216	430	F-box associated interaction domain	TIGR01640	IPR017451 [Display all genes with this domain]
PROSITE profiles	110	149	F-box domain	PS50181	IPR001810 [Display all genes with this domain]
Pfam	116	152	F-box domain	PF00646	IPR001810 [Display all genes with this domain]
SMART	116	156	F-box domain	SM00256	IPR001810 [Display all genes with this domain]
Superfamily	110	164	F-box-like domain superfamily	SSF81383	IPR036047 [Display all genes with this domain]
Superfamily	214	445	Galactose oxidase/kelch, beta-propeller	SSF50965	IPR011043 [Display all genes with this domain]

Other features

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Feature type	Start	End
Ncoils	484	487

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