Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Transcript: BGIOSGA022746-TA

.

Location

Chromosome 6: 12,027,144-12,034,959 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 27 domains and features, is associated with 46 variant alleles and maps to 45 oligo probes.

Gene

This transcript is a product of gene BGIOSGA022746 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	BGIOSGA022746-TA	3573	1190aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8B0W2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

.

General identifiers

.

This transcript corresponds to the following database identifiers:

Download what you see Download whole table

Filter

External database	Database identifier
BGI Gene	LOC_Os06g19660 [Target %id: 99; Query %id: 89] nucleotide binding protein, putative, expressed [view all locations]
EST Cluster (BGI Indica)	alldata.seq.screen.Contig772 [view all locations]
European Nucleotide Archive	CM000131 [align] [view all locations]
GeneIndex	TC284857 Tentative Annotation: UP\|Q5ZA32_ORYSA (Q5ZA32) WD-40 repeat protein-like, partial (90%) [view all locations]
INSDC protein ID	EEC80451.1 [align] [view all locations]
IRGSP/RAP Gene	Os06g0300800 AK100649 [view all locations]
PlantGDB Transcript	PUT-157a-Oryza_sativa-0157353 PlantGDB-assembled Unique Transcript-fragment derived from Oryza_sativa mRNAs Jan_23_2007 (based on GenBank release 157). [view all locations]
STRING	39946.B8B0W2 [view all locations]
UniParc	UPI00018EFAED [view all locations]
UniProtKB/TrEMBL	B8B0W2.70 [Target %id: 100; Query %id: 100] [align] Uncharacterized protein [view all locations]

.

Personal Data