[["rect",[150,5,209,10],{"title":"Exon: BGIOSGA023375-TA.1; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 1 ; Last aa: 45 (2nd base); Start phase: 0; End phase: 1; Length: 134bp, 44 2/3 aa"}],["rect",[206,5,245,10],{"title":"Exon: BGIOSGA023375-TA.2; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 45 (3rd base); Last aa: 72 ; Start phase: 2; End phase: 2; Length: 82bp, 27 1/3 aa"}],["rect",[243,5,278,10],{"title":"Exon: BGIOSGA023375-TA.3; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 73 ; Last aa: 99 (1st base); Start phase: 0; End phase: 0; Length: 79bp, 26 1/3 aa"}],["rect",[276,5,321,10],{"title":"Exon: BGIOSGA023375-TA.4; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 99 (2nd base); Last aa: 131 ; Start phase: 1; End phase: 2; Length: 98bp, 32 2/3 aa"}],["rect",[319,5,346,10],{"title":"Exon: BGIOSGA023375-TA.5; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 132 ; Last aa: 150 ; Start phase: 0; End phase: 2; Length: 57bp, 19 aa"}],["rect",[343,5,383,10],{"title":"Exon: BGIOSGA023375-TA.6; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 151 ; Last aa: 180 (1st base); Start phase: 0; End phase: 0; Length: 88bp, 29 1/3 aa"}],["rect",[381,5,431,10],{"title":"Exon: BGIOSGA023375-TA.7; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 180 (2nd base); Last aa: 216 ; Start phase: 1; End phase: 2; Length: 110bp, 36 2/3 aa"}],["rect",[429,5,475,10],{"title":"Exon: BGIOSGA023375-TA.8; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 217 ; Last aa: 250 ; Start phase: 0; End phase: 2; Length: 102bp, 34 aa"}],["rect",[473,5,539,10],{"title":"Exon: BGIOSGA023375-TA.9; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 251 ; Last aa: 301 (2nd base); Start phase: 0; End phase: 1; Length: 152bp, 50 2/3 aa"}],["rect",[537,5,587,10],{"title":"Exon: BGIOSGA023375-TA.10; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 301 (3rd base); Last aa: 338 (2nd base); Start phase: 2; End phase: 1; Length: 111bp, 37 aa"}],["rect",[585,5,618,10],{"title":"Exon: BGIOSGA023375-TA.11; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 338 (3rd base); Last aa: 361 ; Start phase: 2; End phase: 2; Length: 70bp, 23 1/3 aa"}],["rect",[616,5,635,10],{"title":"Exon: BGIOSGA023375-TA.12; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 362 ; Last aa: 375 (1st base); Start phase: 0; End phase: 0; Length: 40bp, 13 1/3 aa"}],["rect",[633,5,706,10],{"title":"Exon: BGIOSGA023375-TA.13; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 375 (2nd base); Last aa: 430 (1st base); Start phase: 1; End phase: 0; Length: 165bp, 55 aa"}],["rect",[704,5,740,10],{"title":"Exon: BGIOSGA023375-TA.14; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 430 (2nd base); Last aa: 455 ; Start phase: 1; End phase: 2; Length: 77bp, 25 2/3 aa"}],["rect",[737,5,790,10],{"title":"Exon: BGIOSGA023375-TA.15; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 456 ; Last aa: 494 ; Start phase: 0; End phase: 2; Length: 117bp, 39 aa"}],["rect",[788,5,904,10],{"title":"Exon: BGIOSGA023375-TA.16; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 495 ; Last aa: 583 (2nd base); Start phase: 0; End phase: 1; Length: 266bp, 88 2/3 aa"}],["rect",[901,5,945,10],{"title":"Exon: BGIOSGA023375-TA.17; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 583 (3rd base); Last aa: 615 (2nd base); Start phase: 2; End phase: 1; Length: 96bp, 32 aa"}],["rect",[943,5,975,10],{"title":"Exon: BGIOSGA023375-TA.18; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 615 (3rd base); Last aa: 637 ; Start phase: 2; End phase: 2; Length: 67bp, 22 1/3 aa"}],["rect",[973,5,998,10],{"title":"Exon: BGIOSGA023375-TA.19; Location: <a href=\"/Oryza_indica/Location/View?db=core;g=BGIOSGA023375;r=6:28002809-28011017;t=BGIOSGA023375-TA\">6:28002809-28011017</a>; First aa: 638 ; Last aa: 655 ; Start phase: 0; End phase: 2; Length: 54bp, 18 aa"}],["rect",[15,5,112,19],{"alt":"Oryza sativa Indica Group (Oryza sativa Indica Group)","klass":["label","vuliTNbf"]}],["rect",[622,20,657,25],{"title":"MobiDB lite; Position: 366-392"}],["rect",[630,20,657,25],{"title":"MobiDB lite; Position: 372-392"}],["rect",[447,20,517,25],{"title":"MobiDB lite; Position: 230-284"}],["rect",[447,20,480,25],{"title":"MobiDB lite; Position: 230-255"}],["rect",[15,20,82,34],{"alt":"Oryza sativa Indica Group (Oryza sativa Indica Group)","klass":["label","n91FaqCM"]}],["rect",[341,36,359,41],{"title":"Low complexity (Seg); Position: 148-161"}],["rect",[473,36,499,41],{"title":"Low complexity (Seg); Position: 250-270"}],["rect",[684,36,703,41],{"title":"Low complexity (Seg); Position: 414-428"}],["rect",[980,36,996,41],{"title":"Low complexity (Seg); Position: 643-654"}],["rect",[15,36,136,50],{"klass":["label","xXuCSOpw"],"alt":"Oryza sativa Indica Group (Oryza sativa Indica Group)"}],["rect",[151,52,996,57],{"title":"AFDB-ENSP mappings; Position: 1-654"}],["rect",[15,52,124,66],{"alt":"Oryza sativa Indica Group (Oryza sativa Indica Group)","klass":["label","zuYgCNSn"]}],["rect",[204,68,463,82],{"href":"/Oryza_indica/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BGIOSGA023375;pf_id=14389423;r=6:28002809-28011017;t=BGIOSGA023375-TA;track=domain_superfamily;translation_id=19446","title":"Superfamily SSF160897; Positions: 42-181; Interpro: IPR037264; TFIID subunit TAF5, NTD2 domain superfamily"}],["rect",[571,68,988,82],{"href":"/Oryza_indica/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BGIOSGA023375;pf_id=14389417;r=6:28002809-28011017;t=BGIOSGA023375-TA;track=domain_superfamily;translation_id=19446","title":"Superfamily SSF50978; Positions: 326-648; Interpro: IPR036322; WD40-repeat-containing domain superfamily"}],["rect",[15,68,82,82],{"alt":"Oryza sativa Indica Group (Oryza sativa Indica Group)","klass":["label","RWOARLke"]}],["rect",[569,110,928,124],{"href":"/Oryza_indica/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BGIOSGA023375;pf_id=14389559;r=6:28002809-28011017;t=BGIOSGA023375-TA;track=domain_smart;translation_id=19446","title":"SMART SM00320; Positions: 325-602; Interpro: IPR001680; WD40 repeat"}],["rect",[15,110,46,124],{"alt":"Oryza sativa Indica Group (Oryza sativa Indica Group)","klass":["label","CjpdmWoG"]}],["rect",[693,126,930,140],{"title":"Prints PR00320; Positions: 421-603; Interpro: IPR020472; G-protein beta WD-40 repeat","href":"/Oryza_indica/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BGIOSGA023375;pf_id=14389413;r=6:28002809-28011017;t=BGIOSGA023375-TA;track=domain_prints;translation_id=19446"}],["rect",[15,126,52,140],{"klass":["label","d1jIVulP"],"alt":"Oryza sativa Indica Group (Oryza sativa Indica Group)"}],["rect",[578,142,928,156],{"title":"Pfam PF00400; Positions: 332-602; Interpro: IPR001680; WD40 repeat","href":"/Oryza_indica/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BGIOSGA023375;pf_id=14647515;r=6:28002809-28011017;t=BGIOSGA023375-TA;track=domain_pfam;translation_id=19446"}],["rect",[210,142,397,156],{"href":"/Oryza_indica/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BGIOSGA023375;pf_id=14647492;r=6:28002809-28011017;t=BGIOSGA023375-TA;track=domain_pfam;translation_id=19446","title":"Pfam PF04494; Positions: 47-175; Interpro: IPR007582; TFIID subunit TAF5, NTD2 domain"}],["rect",[15,142,40,156],{"klass":["label","HHCBg90W"],"alt":"Oryza sativa Indica Group (Oryza sativa Indica Group)"}],["rect",[578,164,940,178],{"title":"PROSITE profiles PS50082; Positions: 332-611; Interpro: IPR001680; WD40 repeat","href":"/Oryza_indica/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BGIOSGA023375;pf_id=14389529;r=6:28002809-28011017;t=BGIOSGA023375-TA;track=domain_pfscan;translation_id=19446"}],["rect",[669,183,932,197],{"href":"/Oryza_indica/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BGIOSGA023375;pf_id=14389535;r=6:28002809-28011017;t=BGIOSGA023375-TA;track=domain_pfscan;translation_id=19446","title":"PROSITE profiles PS50294; Positions: 402-605"}],["rect",[15,164,112,178],{"klass":["label","vqIGDgcp"],"alt":"Oryza sativa Indica Group (Oryza sativa Indica Group)"}],["rect",[603,198,930,212],{"href":"/Oryza_indica/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BGIOSGA023375;pf_id=14389589;r=6:28002809-28011017;t=BGIOSGA023375-TA;track=domain_scanprosite;translation_id=19446","title":"PROSITE patterns PS00678; Positions: 351-603; Interpro: IPR019775; WD40 repeat, conserved site"}],["rect",[15,198,112,212],{"alt":"Oryza sativa Indica Group (Oryza sativa Indica Group)","klass":["label","FGANNQER"]}],["rect",[152,214,989,228],{"title":"PANTHER PTHR19879; Positions: 2-649","href":"/Oryza_indica/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BGIOSGA023375;pf_id=14263495;r=6:28002809-28011017;t=BGIOSGA023375-TA;track=domain_hmmpanther;translation_id=19446"}],["rect",[15,214,58,228],{"alt":"Oryza sativa Indica Group (Oryza sativa Indica Group)","klass":["label","oFRpXm1j"]}],["rect",[161,236,420,250],{"href":"/Oryza_indica/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BGIOSGA023375;pf_id=14389429;r=6:28002809-28011017;t=BGIOSGA023375-TA;track=domain_gene3d;translation_id=19446","title":"Gene3D 1.25.40.500; Positions: 9-181; Interpro: IPR037264; TFIID subunit TAF5, NTD2 domain superfamily"}],["rect",[553,236,992,250],{"title":"Gene3D 2.130.10.10; Positions: 312-651; Interpro: IPR015943; WD40/YVTN repeat-like-containing domain superfamily","href":"/Oryza_indica/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BGIOSGA023375;pf_id=14389485;r=6:28002809-28011017;t=BGIOSGA023375-TA;track=domain_gene3d;translation_id=19446"}],["rect",[15,236,52,250],{"alt":"Oryza sativa Indica Group (Oryza sativa Indica Group)","klass":["label","h1nDG8IS"]}],["rect",[214,258,401,272],{"title":"CDD cd08044; Positions: 50-182; Interpro: IPR007582; TFIID subunit TAF5, NTD2 domain","href":"/Oryza_indica/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BGIOSGA023375;pf_id=14389566;r=6:28002809-28011017;t=BGIOSGA023375-TA;track=domain_cdd;translation_id=19446"}],["rect",[669,258,989,272],{"title":"CDD cd00200; Positions: 402-649","href":"/Oryza_indica/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BGIOSGA023375;pf_id=14389564;r=6:28002809-28011017;t=BGIOSGA023375-TA;track=domain_cdd;translation_id=19446"}],["rect",[15,258,34,272],{"alt":"Oryza sativa Indica Group (Oryza sativa Indica Group)","klass":["label","oePv6M8E"]}],["rect",[408,316,410,326],{"href":"/Oryza_indica/ZMenu/Variation/VariationProtein?al=G/C;ar=K%2C N;cod=AA%5BS%5D;config=protview;db=core;g=BGIOSGA023375;r=6:28002809-28011017;res=201;t=BGIOSGA023375-TA;track=variation_feature_variation;v=rs54185960;vf=3474785"}],["rect",[330,316,333,326],{"href":"/Oryza_indica/ZMenu/Variation/VariationProtein?al=C/A;ar=Q%2C K;cod=%5BM%5DAA;config=protview;db=core;g=BGIOSGA023375;r=6:28002809-28011017;res=141;t=BGIOSGA023375-TA;track=variation_feature_variation;v=rs19945534;vf=125213"}],["rect",[286,316,289,326],{"href":"/Oryza_indica/ZMenu/Variation/VariationProtein?al=G/A;ar=R%2C H;cod=C%5BR%5DT;config=protview;db=core;g=BGIOSGA023375;r=6:28002809-28011017;res=107;t=BGIOSGA023375-TA;track=variation_feature_variation;v=rs19945524;vf=130074"}],["rect",[365,316,368,326],{"href":"/Oryza_indica/ZMenu/Variation/VariationProtein?al=T/G;ar=V;cod=GT%5BK%5D;config=protview;db=core;g=BGIOSGA023375;r=6:28002809-28011017;res=168;t=BGIOSGA023375-TA;track=variation_feature_variation;v=rs53686475;vf=2942351"}],["rect",[462,316,464,326],{"href":"/Oryza_indica/ZMenu/Variation/VariationProtein?al=A/G;ar=A;cod=GC%5BR%5D;config=protview;db=core;g=BGIOSGA023375;r=6:28002809-28011017;res=243;t=BGIOSGA023375-TA;track=variation_feature_variation;v=rs54161813;vf=3441848"}],["rect",[511,316,514,326],{"href":"/Oryza_indica/ZMenu/Variation/VariationProtein?al=C/T;ar=S;cod=TC%5BY%5D;config=protview;db=core;g=BGIOSGA023375;r=6:28002809-28011017;res=281;t=BGIOSGA023375-TA;track=variation_feature_variation;v=rs19945574;vf=131402"}],["rect",[352,316,355,326],{"href":"/Oryza_indica/ZMenu/Variation/VariationProtein?al=A/G;ar=Q;cod=CA%5BR%5D;config=protview;db=core;g=BGIOSGA023375;r=6:28002809-28011017;res=158;t=BGIOSGA023375-TA;track=variation_feature_variation;v=rs19945554;vf=119797"}],["rect",[347,316,349,326],{"href":"/Oryza_indica/ZMenu/Variation/VariationProtein?al=G/A;ar=E;cod=GA%5BR%5D;config=protview;db=core;g=BGIOSGA023375;r=6:28002809-28011017;res=154;t=BGIOSGA023375-TA;track=variation_feature_variation;v=rs54169744;vf=3428483"}],["rect",[407,316,409,326],{"href":"/Oryza_indica/ZMenu/Variation/VariationProtein?al=A/C;ar=T;cod=AC%5BM%5D;config=protview;db=core;g=BGIOSGA023375;r=6:28002809-28011017;res=200;t=BGIOSGA023375-TA;track=variation_feature_variation;v=rs53705847;vf=2957748"}],["rect",[370,316,373,326],{"href":"/Oryza_indica/ZMenu/Variation/VariationProtein?al=A/C;ar=I;cod=AT%5BM%5D;config=protview;db=core;g=BGIOSGA023375;r=6:28002809-28011017;res=172;t=BGIOSGA023375-TA;track=variation_feature_variation;v=rs53486177;vf=2756006"}],["rect",[987,316,989,326],{"href":"/Oryza_indica/ZMenu/Variation/VariationProtein?al=C/T;ar=A;cod=GC%5BY%5D;config=protview;db=core;g=BGIOSGA023375;r=6:28002809-28011017;res=649;t=BGIOSGA023375-TA;track=variation_feature_variation;v=rs19945683;vf=118675"}],["rect",[368,316,370,326],{"href":"/Oryza_indica/ZMenu/Variation/VariationProtein?al=A/G;ar=G;cod=GG%5BR%5D;config=protview;db=core;g=BGIOSGA023375;r=6:28002809-28011017;res=170;t=BGIOSGA023375-TA;track=variation_feature_variation;v=rs53539946;vf=2795761"}],["rect",[408,329,410,339],{"href":"/Oryza_indica/ZMenu/Variation/VariationProtein?al=A/G;ar=K%2C R;cod=A%5BR%5DG;config=protview;db=core;g=BGIOSGA023375;r=6:28002809-28011017;res=201;t=BGIOSGA023375-TA;track=variation_feature_variation;v=rs54303082;vf=3594339"}],["rect",[15,306,142,320],{"klass":["label","MsRE6eqE"],"alt":"Oryza sativa Indica Group (Oryza sativa Indica Group)"}],["rect",[15,352,100,366],{"alt":"Oryza sativa Indica Group (Oryza sativa Indica Group)","klass":["label","itO5qoqi"]}],["rect",[15,391,70,405],{"alt":"Oryza sativa Indica Group (Oryza sativa Indica Group)","klass":["label","c6Ny0Rtr"]}]]
NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).
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Protein domains and motifs from the TIGRFAM database.
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