Transcript: BGIOSGA022338-TA

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	BGIOSGA022338-TA	2112	703aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8B2Z7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence

Markup

loadingloaded

▼▲


..........agaagagagagagagagagagagagagagagagaggagtagacgtcgccc
ATGGCGGAAGAGGAGGAGGAGGAGGAGGTGGAGGAGGGGAGGTCCTCGTCGTCGGCGATA
CTGGACCTGCCGGAGCCGCTGCTGCTGCACATCCTGAGCTTCCTGACGGAC         
gtgaggtctcggcacagggcggcgc..........cgcggatctcgagccgctgctggag
ACCTGCGCCGCGCTCCGGGAGCTCGACCTGTCGGAGTTCTACTGCTGGACCGAGGACGTC
GTGAGGGCGCTCACCACGCACCCTTCCGCCACCGCGGCGCTCACCCACCTCGACCTCGGC
CTCGCCGCCGCCACCGACGGCTTCAAATCCTCCGAGCTTGGGCCAATCGCGGCCTCCTGC
CCCAACCTCCGCAAGCTCGTGGCGCCATGCTTGTTCAACCCACGGTTCAGCGATTGCGTC
GGCGACGACGCGCTGCTCTCGCTGGCCACCAGCTGCCCGCGGCTGACCGTCTTGCGGCTC
AGCGAGCCGTTCGAGGCTGCGGCCAACATCCAGAGGGAGGAGGCGGCCATCACCGTTGCG
GGGCTAGTCGCCTTCTTCGCGGCGCTCCCCGCGCTGGAGGATTTCACCATGGATCTCCAG
CACAATGTGCTGGAGGCCGCGCCCGCGATGGAGGCGCTTGCCCGAAGGTGCCCGCGGATC
AAGTTCTTGACCCTGGGTTCCTTCCAGGGGCTGTGTAAGGCCTCTTGGTTGCATCTTGAT
GGTGTTGCGGTGTGCGGTGGGCTGGAGTCACTTTACATGAAGAATTGCCAGGATCTCACG
GATGCCAGCCTTGCGGCAATTGGCCGTGGGTGCCGGAGGCTTGCTAAGTTCGGCATCCAT
GGCTGTGACCTTGTCACTTCGGCTGGGATCAGGAGGCTTGCATTCACGCTTCGGCCTACT
CTCAAGGAAGTCACTGTCTTGCACTGCCGGCTTCTGCACACTGCAGAATGTCTCACTGCT
CTAAGTCCGATCCGTGATCGCATTGAAAGTCTTGAGATCAACTGTGTCTGGAACACAACC
GAACAACCCTGCAGTGTTGCAAATGGCACCACCACCGAATGCGATCCTGAGGATGATGAG
CTTGGTGAAGTGTACGAGTCTGCAGCCAAGAAATGTAGGTACATGGAATTTGATGATCTT
GGAAGCTGGGAGATGCTCAGGTCACTCTCCCTATGGTTCTCTGCTGGCCAGCTTCTCTCT
CCGCTCATTTCTGCTGGTCTCGATAGCTGTCCCGTGCTTGAGGAGATCTCAATTAAGGTG
GAGGGTGATTGCCGGACATGCCCACGACCTGCTCCAAGAACAATTTTTGGCTTAAGTGAT
CTTGCAGGCTTCCCAGTATTAGCCAAGATGAAATTGGACCTCAGTGAAGCTGTGGGTTAT
GCACTTACTGCACCAACAGGGCAGATGGATCTTTCACTATGGGAGCGATTTTATTTGCAT
GGTATCGAATCACTGCAGACTTTGTATGAATTGGACTACTGGCCGCCCCAAGACAAGGAT
GTGCACCACCGGAGCCTGACATTGCCAGCCGTGGGATTGATCCAACGCTGCGTTGGACTC
AGGAAGCTTTTCATCCATGGCACCACACATGAGCACTTCATGACCTTCTTCCTTTCAATT
CCAAACTTGCGGGACATGCAGTTGCGGGAGGACTATTATCCAGCCCCAGAGAATGATCTG
ATGTTCACAGAGATGCGGGCTGAATCTTGGCTTAG                         
gtttgaggtgcaactgaacagccgg..........ctttccttttccatttcatgcacag
GCTTGGTGACAAATGGGATGGCATGTGCAGATGTGCAAGCCAGTTTTGCATGTCATTATC
GGGCATGTTGAGTTGCAACACCGGCTACAACAAG                          
gtttactttaatacacagcagtaag..........aatttttttcctcctccatatgcag
CCCTCACATCGTTCACTGGATGGCTACAAGCACATTGTGAATATGGAATATTGTTCGCCT
ATATCATCTGATGGCCCTCATTTCCCTCTGCAAGCTGCCAGAGCCAAAGAAGCTGCACAG
AGTAGACCAAACAAAGAAAACACTGAAGAATATCACGAAATGATGGAAG           
gtgagtaggacctttttcagtagac..........catcaattctgtgttctggtaacag
AGGAGATGATCCATGGCTTGCAGAGGGTCGGTTGGAAGAAAGTAGATGTCAACTTCCATA
CAGCACTATGGCCTTACTTTGCTCATAACAACATACAT                      
gtatgttagtagtatgtactgcata..........agttcatggcatcaatgcaatgcag
GTTAAGAATGAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCCCATGTGGCGGACAGC
ATAAAACAGCAGGAGTCACGGAAATATTTCCGTGCCAACTTATAA               
gatcttcagtcccctgtgctgcatggtcagaagtataataactatggttt..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........agaagagagagagagagagagagagagagagagaggagtagacgtcgccc
1	BGIOSGA022338-TA.1	3,328,465	3,328,575	0	0	111	ATGGCGGAAGAGGAGGAGGAGGAGGAGGTGGAGGAGGGGAGGTCCTCGTCGTCGGCGATA CTGGACCTGCCGGAGCCGCTGCTGCTGCACATCCTGAGCTTCCTGACGGAC
	Intron 1-2	3,328,576	3,329,064			489	gtgaggtctcggcacagggcggcgc..........cgcggatctcgagccgctgctggag
2	BGIOSGA022338-TA.2	3,329,065	3,330,599	0	2	1,535	ACCTGCGCCGCGCTCCGGGAGCTCGACCTGTCGGAGTTCTACTGCTGGACCGAGGACGTC GTGAGGGCGCTCACCACGCACCCTTCCGCCACCGCGGCGCTCACCCACCTCGACCTCGGC CTCGCCGCCGCCACCGACGGCTTCAAATCCTCCGAGCTTGGGCCAATCGCGGCCTCCTGC CCCAACCTCCGCAAGCTCGTGGCGCCATGCTTGTTCAACCCACGGTTCAGCGATTGCGTC GGCGACGACGCGCTGCTCTCGCTGGCCACCAGCTGCCCGCGGCTGACCGTCTTGCGGCTC AGCGAGCCGTTCGAGGCTGCGGCCAACATCCAGAGGGAGGAGGCGGCCATCACCGTTGCG GGGCTAGTCGCCTTCTTCGCGGCGCTCCCCGCGCTGGAGGATTTCACCATGGATCTCCAG CACAATGTGCTGGAGGCCGCGCCCGCGATGGAGGCGCTTGCCCGAAGGTGCCCGCGGATC AAGTTCTTGACCCTGGGTTCCTTCCAGGGGCTGTGTAAGGCCTCTTGGTTGCATCTTGAT GGTGTTGCGGTGTGCGGTGGGCTGGAGTCACTTTACATGAAGAATTGCCAGGATCTCACG GATGCCAGCCTTGCGGCAATTGGCCGTGGGTGCCGGAGGCTTGCTAAGTTCGGCATCCAT GGCTGTGACCTTGTCACTTCGGCTGGGATCAGGAGGCTTGCATTCACGCTTCGGCCTACT CTCAAGGAAGTCACTGTCTTGCACTGCCGGCTTCTGCACACTGCAGAATGTCTCACTGCT CTAAGTCCGATCCGTGATCGCATTGAAAGTCTTGAGATCAACTGTGTCTGGAACACAACC GAACAACCCTGCAGTGTTGCAAATGGCACCACCACCGAATGCGATCCTGAGGATGATGAG CTTGGTGAAGTGTACGAGTCTGCAGCCAAGAAATGTAGGTACATGGAATTTGATGATCTT GGAAGCTGGGAGATGCTCAGGTCACTCTCCCTATGGTTCTCTGCTGGCCAGCTTCTCTCT CCGCTCATTTCTGCTGGTCTCGATAGCTGTCCCGTGCTTGAGGAGATCTCAATTAAGGTG GAGGGTGATTGCCGGACATGCCCACGACCTGCTCCAAGAACAATTTTTGGCTTAAGTGAT CTTGCAGGCTTCCCAGTATTAGCCAAGATGAAATTGGACCTCAGTGAAGCTGTGGGTTAT GCACTTACTGCACCAACAGGGCAGATGGATCTTTCACTATGGGAGCGATTTTATTTGCAT GGTATCGAATCACTGCAGACTTTGTATGAATTGGACTACTGGCCGCCCCAAGACAAGGAT GTGCACCACCGGAGCCTGACATTGCCAGCCGTGGGATTGATCCAACGCTGCGTTGGACTC AGGAAGCTTTTCATCCATGGCACCACACATGAGCACTTCATGACCTTCTTCCTTTCAATT CCAAACTTGCGGGACATGCAGTTGCGGGAGGACTATTATCCAGCCCCAGAGAATGATCTG ATGTTCACAGAGATGCGGGCTGAATCTTGGCTTAG
	Intron 2-3	3,330,600	3,331,276			677	gtttgaggtgcaactgaacagccgg..........ctttccttttccatttcatgcacag
3	BGIOSGA022338-TA.3	3,331,277	3,331,370	2	0	94	GCTTGGTGACAAATGGGATGGCATGTGCAGATGTGCAAGCCAGTTTTGCATGTCATTATC GGGCATGTTGAGTTGCAACACCGGCTACAACAAG
	Intron 3-4	3,331,371	3,337,529			6,159	gtttactttaatacacagcagtaag..........aatttttttcctcctccatatgcag
4	BGIOSGA022338-TA.4	3,337,530	3,337,698	0	1	169	CCCTCACATCGTTCACTGGATGGCTACAAGCACATTGTGAATATGGAATATTGTTCGCCT ATATCATCTGATGGCCCTCATTTCCCTCTGCAAGCTGCCAGAGCCAAAGAAGCTGCACAG AGTAGACCAAACAAAGAAAACACTGAAGAATATCACGAAATGATGGAAG
	Intron 4-5	3,337,699	3,337,798			100	gtgagtaggacctttttcagtagac..........catcaattctgtgttctggtaacag
5	BGIOSGA022338-TA.5	3,337,799	3,337,896	1	0	98	AGGAGATGATCCATGGCTTGCAGAGGGTCGGTTGGAAGAAAGTAGATGTCAACTTCCATA CAGCACTATGGCCTTACTTTGCTCATAACAACATACAT
	Intron 5-6	3,337,897	3,337,988			92	gtatgttagtagtatgtactgcata..........agttcatggcatcaatgcaatgcag
6	BGIOSGA022338-TA.6	3,337,989	3,338,093	0	0	105	GTTAAGAATGAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCCCATGTGGCGGACAGC ATAAAACAGCAGGAGTCACGGAAATATTTCCGTGCCAACTTATAA
	3' downstream sequence						gatcttcagtcccctgtgctgcatggtcagaagtataataactatggttt..........

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Transcript: BGIOSGA022338-TA

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