5' upstream sequence
{"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only","provisional":{"expect":[],"seq":[{"style":[1]}],"flourishes":{},"legend":{"exons/Introns":{"flanking":{"default":null,"text":"Flanking sequence","label":"#008000","class":"ef"}},"_messages":[]},"ref":{"style":[[0,""],[0,"color:#008000"]]}}}
..........agcggacaccggcgacgagcgcgaggaggaggaggaggaggaaggagaag
1 BGIOSGA020296-TA.1 28,342,802 28,342,876 0 0 75
{"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only","provisional":{"flourishes":{},"legend":{"exons/Introns":{"flanking":{"text":"Flanking sequence","default":null,"label":"#008000","class":"ef"},"exon1":{"text":"Translated sequence","default":null,"class":"e1","label":"#1044ee"}},"_messages":[]},"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"expect":[],"seq":[{"style":[1]},{"style":[1,-14,0]}]}}
ATGGCGGCGACGCTGTCGCAGCTCGACGACGGGATCGTCCGCGGGATGGCCATCGGCGCG GTATTCACCGACTAC
Intron 1-2 28,342,877 28,342,958 82
{"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only","provisional":{"legend":{"exons/Introns":{"exon1":{"default":null,"text":"Translated sequence","label":"#1044ee","class":"e1"},"intron":{"default":null,"text":"Intron sequence","label":"#aaaaaa","class":"ei"},"flanking":{"label":"#008000","class":"ef","text":"Flanking sequence","default":null}},"_messages":[]},"flourishes":{},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"expect":[],"seq":[{"style":[1]}]}}
gtgagttctcccgccgcgaaaatcc..........ctaatcgaatcggtggtggtggcag
2 BGIOSGA020296-TA.2 28,342,959 28,343,059 0 2 101
{"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only","provisional":{"expect":[],"seq":[{"style":[1]},{"style":[1,-40,0]}],"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"legend":{"exons/Introns":{"exon1":{"label":"#1044ee","class":"e1","text":"Translated sequence","default":null},"intron":{"label":"#aaaaaa","class":"ei","default":null,"text":"Intron sequence"},"flanking":{"text":"Flanking sequence","default":null,"class":"ef","label":"#008000"}},"_messages":[]},"flourishes":{}}}
GCTGGGAAGATAAACTGCCTCGACTTCCACCGCAAGGAGGATCTCCTCGTCACCTCCAGC GAGGACGACTCCATACGCCTCTACAACATCACCAGCGCCAC
Intron 2-3 28,343,060 28,343,660 601
{"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only","provisional":{"seq":[{"style":[1]}],"expect":[],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"legend":{"exons/Introns":{"exon1":{"text":"Translated sequence","default":null,"class":"e1","label":"#1044ee"},"intron":{"class":"ei","label":"#aaaaaa","default":null,"text":"Intron sequence"},"flanking":{"class":"ef","label":"#008000","default":null,"text":"Flanking sequence"}},"_messages":[]},"flourishes":{}}}
gtgagtgcactgattttgttttatt..........ttataaatggggggctattgtttag
3 BGIOSGA020296-TA.3 28,343,661 28,343,834 2 2 174
{"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only","provisional":{"expect":[],"seq":[{"style":[1]},-1,{"style":[1,-53,0]}],"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"legend":{"exons/Introns":{"exon1":{"text":"Translated sequence","default":null,"class":"e1","label":"#1044ee"},"intron":{"label":"#aaaaaa","class":"ei","text":"Intron sequence","default":null},"flanking":{"text":"Flanking sequence","default":null,"class":"ef","label":"#008000"}},"_messages":[]},"flourishes":{}}}
GTTGTTGAAGACTACATATCATAGGAAACATGGTGCTGACCGTGTCTGTTTCACTCACCA TCCGAGTTCTATCTTATGTTCATCAAGATACAATCTAGAGTCAGCAGAGTCACTTCGTTA TTTATCACTGTATGACAACCGTTGCTTAAGATATTTTAAAGGACACAAAGACAG
Intron 3-4 28,343,835 28,343,913 79
{"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only","provisional":{"expect":[],"seq":[{"style":[1]}],"flourishes":{},"legend":{"exons/Introns":{"exon1":{"label":"#1044ee","class":"e1","text":"Translated sequence","default":null},"intron":{"text":"Intron sequence","default":null,"label":"#aaaaaa","class":"ei"},"flanking":{"class":"ef","label":"#008000","text":"Flanking sequence","default":null}},"_messages":[]},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}}}
gttggctatgttcttgtttctttct..........tgagaggtgcactatttcatttcag
4 BGIOSGA020296-TA.4 28,343,914 28,344,013 2 0 100
{"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only","provisional":{"legend":{"exons/Introns":{"exon1":{"class":"e1","label":"#1044ee","default":null,"text":"Translated sequence"},"intron":{"text":"Intron sequence","default":null,"class":"ei","label":"#aaaaaa"},"flanking":{"default":null,"text":"Flanking sequence","label":"#008000","class":"ef"}},"_messages":[]},"flourishes":{},"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"expect":[],"seq":[{"style":[1]},{"style":[1,-39,0]}]}}
GGTTGTTTCACTATGTATGTCACCTGTCAACGATAGTTTTATGTCAGGATCACTTGATCA CAGTGTCAGGATATGGGATCTTCGTGTAAATGCTTGTCAG
Intron 4-5 28,344,014 28,344,130 117
{"provisional":{"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"legend":{"exons/Introns":{"exon1":{"text":"Translated sequence","default":null,"class":"e1","label":"#1044ee"},"intron":{"label":"#aaaaaa","class":"ei","default":null,"text":"Intron sequence"},"flanking":{"label":"#008000","class":"ef","text":"Flanking sequence","default":null}},"_messages":[]},"flourishes":{},"seq":[{"style":[1]}],"expect":[]},"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only"}
gttcggacaccattccttgtttaat..........tccatgcttacttgtttagcattag
5 BGIOSGA020296-TA.5 28,344,131 28,344,247 0 0 117
{"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"legend":{"exons/Introns":{"exon1":{"class":"e1","label":"#1044ee","default":null,"text":"Translated sequence"},"intron":{"class":"ei","label":"#aaaaaa","default":null,"text":"Intron sequence"},"flanking":{"default":null,"text":"Flanking sequence","label":"#008000","class":"ef"}},"_messages":[]},"flourishes":{},"expect":[],"seq":[{"style":[1]},{"style":[1,-56,0]}]}}
GGTATACTACGTTTGCGTGGTAGGCCTTCTGTTGCATATGATCAGCAGGGACTTGTTTTT GCCGTGGCAATGGAAGGAGGTGCTATTAAGCTATTTGATTCCCGGTCATATGACAAA
Intron 5-6 28,344,248 28,344,333 86
{"provisional":{"flourishes":{},"legend":{"exons/Introns":{"exon1":{"text":"Translated sequence","default":null,"class":"e1","label":"#1044ee"},"intron":{"label":"#aaaaaa","class":"ei","text":"Intron sequence","default":null},"flanking":{"label":"#008000","class":"ef","text":"Flanking sequence","default":null}},"_messages":[]},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"expect":[],"seq":[{"style":[1]}]},"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only"}
gttggtattcagcttgaatctcaaa..........tcttgggtgccaaatacaatttcag
6 BGIOSGA020296-TA.6 28,344,334 28,344,471 0 0 138
{"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only","provisional":{"legend":{"exons/Introns":{"exon1":{"default":null,"text":"Translated sequence","label":"#1044ee","class":"e1"},"intron":{"class":"ei","label":"#aaaaaa","text":"Intron sequence","default":null},"flanking":{"default":null,"text":"Flanking sequence","class":"ef","label":"#008000"}},"_messages":[]},"flourishes":{},"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"expect":[],"seq":[{"style":[1]},-1,{"style":[1,-17,0]}]}}
GGTCCCTTTGACACTTTCTTGGTTGGTGGAGATACAGCTGAAGTTTCTGACATCAAATTT AGCAATGATGGCAAGTCCATGCTTTTGACAACAACCAACAACCATATATATGTTCTGGAT GCATATGGAGGGGATAAG
Intron 6-7 28,344,472 28,344,568 97
{"provisional":{"seq":[{"style":[1]}],"expect":[],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"legend":{"exons/Introns":{"exon1":{"default":null,"text":"Translated sequence","label":"#1044ee","class":"e1"},"intron":{"default":null,"text":"Intron sequence","label":"#aaaaaa","class":"ei"},"flanking":{"class":"ef","label":"#008000","default":null,"text":"Flanking sequence"}},"_messages":[]},"flourishes":{}},"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only"}
gtcagttacttctgttgcagaaaaa..........tgacaccctcaaaatccttttgcag
7 BGIOSGA020296-TA.7 28,344,569 28,344,650 0 1 82
{"provisional":{"seq":[{"style":[1]},{"style":[1,-21,0]}],"expect":[],"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"flourishes":{},"legend":{"exons/Introns":{"exon1":{"default":null,"text":"Translated sequence","class":"e1","label":"#1044ee"},"intron":{"label":"#aaaaaa","class":"ei","text":"Intron sequence","default":null},"flanking":{"default":null,"text":"Flanking sequence","label":"#008000","class":"ef"}},"_messages":[]}},"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only"}
AGGTGTGGCTTTAGTCTGGAGTCATCTCCCAATGTAGCAACTGAAGCTGCTTTTACTCCA GATGGCCAATATGTAATTTCAG
Intron 7-8 28,344,651 28,345,095 445
{"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"flourishes":{},"legend":{"exons/Introns":{"exon1":{"text":"Translated sequence","default":null,"label":"#1044ee","class":"e1"},"intron":{"class":"ei","label":"#aaaaaa","text":"Intron sequence","default":null},"flanking":{"class":"ef","label":"#008000","text":"Flanking sequence","default":null}},"_messages":[]},"seq":[{"style":[1]}],"expect":[]}}
gtatgatattcttgtttttccattt..........aaaacctttttgcttgattttgcag
8 BGIOSGA020296-TA.8 28,345,096 28,345,145 1 0 50
{"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only","provisional":{"expect":[],"seq":[{"style":[1,-49,0]}],"flourishes":{},"legend":{"exons/Introns":{"exon1":{"class":"e1","label":"#1044ee","default":null,"text":"Translated sequence"},"intron":{"text":"Intron sequence","default":null,"label":"#aaaaaa","class":"ei"},"flanking":{"label":"#008000","class":"ef","text":"Flanking sequence","default":null}},"_messages":[]},"ref":{"style":[[0,""],[0,"color:#1044ee"]]}}}
GATCTGGTGATGGTACCTTGCATGCTTGGAACATCAATACAATACAAGAG
Intron 8-9 28,345,146 28,345,212 67
{"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only","provisional":{"expect":[],"seq":[{"style":[1]}],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"legend":{"exons/Introns":{"exon1":{"class":"e1","label":"#1044ee","default":null,"text":"Translated sequence"},"intron":{"text":"Intron sequence","default":null,"label":"#aaaaaa","class":"ei"},"flanking":{"text":"Flanking sequence","default":null,"label":"#008000","class":"ef"}},"_messages":[]},"flourishes":{}}}
gtgctctttcttaaatcatgctttt..........ctcttaagtgtttttccttttgtag
9 BGIOSGA020296-TA.9 28,345,213 28,345,338 0 0 126
{"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only","provisional":{"seq":[{"style":[1]},-1,{"style":[1,-5,0]}],"expect":[],"legend":{"exons/Introns":{"exon1":{"class":"e1","label":"#1044ee","default":null,"text":"Translated sequence"},"intron":{"text":"Intron sequence","default":null,"label":"#aaaaaa","class":"ei"},"flanking":{"default":null,"text":"Flanking sequence","label":"#008000","class":"ef"}},"_messages":[]},"flourishes":{},"ref":{"style":[[0,""],[0,"color:#1044ee"]]}}}
ATTGCTTGTTGGAACAGTCACATCGGTCCTATCACTGCTTTGAAGTGGGCTCCCCGTCGA GCAATGTTTGCAACTGCGTCAACTGCCCTAACTTTCTGGATTCCCAATAATTCCAGTTCG AATTAG
3' downstream sequence
{"url":"/Oryza_indica/Component/Transcript/Exons/exons?g=BGIOSGA020296;r=50X0P+028342802-28345338;t=BGIOSGA020296-TA;db=core;time=1743994026188.188;adorn=only","provisional":{"flourishes":{},"legend":{"exons/Introns":{"exon1":{"text":"Translated sequence","default":null,"label":"#1044ee","class":"e1"},"intron":{"text":"Intron sequence","default":null,"label":"#aaaaaa","class":"ei"},"flanking":{"class":"ef","label":"#008000","default":null,"text":"Flanking sequence"}},"_messages":[]},"ref":{"style":[[0,""],[0,"color:#008000"]]},"expect":[],"seq":[{"style":[1]}]}}
gtgcctagcaaaaaggatggaacgtgtgatatgctgattcaacaaacact..........
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