Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Export data

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Transcript: BGIOSGA012916-TA

.

Description

Membrane-anchored ubiquitin-fold protein [Source:UniProtKB/TrEMBL;Acc:B8AKH2]

Location

Chromosome 3: 19,965,188-19,968,150 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 10 domains and features, is associated with 15 variant alleles and maps to 31 oligo probes.

Gene

This transcript is a product of gene BGIOSGA012916 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	BGIOSGA012916-TA	360	119aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8AKH2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

.

Exons

.

Download sequence

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence

Markup

loadingloaded

▼▲

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........gctttttttctattgttgttgtcatcagctggcgttgggggggctcagag
1	BGIOSGA012916-TA.1	19,965,188	19,965,323	0	1	136	ATGTCCGGCGGCGTGCAGGAGCAGTTCGAGATCAAGTTCCGGCTGCCGGACGGCACCGAC ATCGGGCCCAAGAGGTACCCGGCGGCCTCCACCGTCGCCACGCTCAAGGAATCCATCGTT GCTCAATGGCCTAAAG
	Intron 1-2	19,965,324	19,967,845			2,522	gttttctctcttgtactcgataaag..........gacttattttttgtactcccagcag
2	BGIOSGA012916-TA.2	19,967,846	19,968,013	1	1	168	ATAAGGAAAAGGGCCCAAGGACTGTAAATGACCTCAAGCTTATTAATGCTGGGAAGATAT TGGAGAACAACAAAACCCTTTCAGAATGCAAAAGCCCAATTTGTGACTTCTCTGGATTGA CAACAATGCATGTCGTAGTTCGTGCTCCTACTTCAGACAAACAGTCCA
	Intron 2-3	19,968,014	19,968,094			81	gtaagtgttctatcttttgcaaggt..........tttgtttttcatcaactgtcaacag
3	BGIOSGA012916-TA.3	19,968,095	19,968,150	1	0	56	ATAAAATAGTAGCCAAGAAGCCAAAGGATTTCAGGTGTGGTTGTTCCATCATGTGA
	3' downstream sequence						cagctttgtgaatagtagcagtacagcgaggaagtgtcagctattgaact..........

.