Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: BGIOSGA005295-TA

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Location

Chromosome 2: 38,032,258-38,035,358 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 22 domains and features, is associated with 1245 variant alleles and maps to 33 oligo probes.

Gene

This transcript is a product of gene BGIOSGA005295 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	BGIOSGA005295-TA	1464	487aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8AFJ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Exons

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Download sequence

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence

Markup

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No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........gagagaaggtgtggtggtggaaggaaccctagcggcggcgaccggctccg
1	BGIOSGA005295-TA.1	38,035,358	38,034,163	0	2	1,196	ATGGCCCCTCCACCGCCGTCTCCGTCCCCATCTCCGGCGAGCGGCGCGCAGTACGCGCAC CAGTTCCTGAACACGGCGCTCTCCCAGCGCGGGCCCTCCGCCCTGCCCTACGCGGAGGAC GTGAAGTGGCTGATCCGCAACCACCTCGTCGCCCTCGCCGACGCTTTCCCCTCGCTCCAC CCCAAGGCCGCCCTCTTCACCCACAACGACGGCCGCGCCGCCCACCTCCTCCAGGCCGAC GGCACCATCCCCATCCACCACGCCGGCGCCTCCTACAACCTCCCCGCTGTCCTCTGGCTC CCGGAGCCCTACCCGCGGTCGCCGCCCCTCGTCTTCCTCTCCCCAACACGCGACATGGTC ATCAAGCCCCACCACCCCCTCGTCGACCGCTCCGGCCTCGTCGCCAACGCCCCTTACCTC CGCTCTTGGGTTTTCCCCTCCTCCAACCTCGTCGATCTCGTCCGATCCCTCTCTCACCTG TTCGGCCTCGACCCGCCCCTCTTCACCAGGAGCCCCAATCCCCCACCCCCTTCCCCTTCC CCGCCGATCCCTGCCACCCCGCTCCCTCGCGTCCACCCCTCCTCCTCCTCCTCCCCCTCC CCATCCCCCTACAGATTCCCTGCCTCGCCCCAGCTTGCCGCGCGCCCCCCACCCACCGAA GACCCCGCTGAGGTCTACAAGCGCAATGCCATCGCTAAGCTCGTTGACATGGCCTATGCC GATGCCGCCACGCTGCGCCCAGTCCGCGAGGCTGAGGTCGACACTCTCTTCGCCATGCAG GCTACGCTGCGCAGCCGGGGGGAGGTGGTCTCTGATGGGGTGCGCAAGATGGGGGAGGAG AAGGAGGCACTTGAGCGCCGCCTGCAGGATGTAATGATGGCCACGGACCTCATGGAGGCG TGGGTCATGGAGAACACCAAGGGTGCTGCCGGCGACACTGAAGCGGACGAGGCAATTGAG ACCGCAGATGTACTGTCTAAGCAGATGCTTGAGTGCACTGCTGCTGATTTGGCACTCGAG GACACCATTTATGCGCTTGACAAGGCCATTCAGGAGGGTTCTGTGCCATTTGATGGCTAC CTCAGGAGCGTGCGCGCGCTTGCACGGGAGCAGTTTTTCCAACGCGTCCTGTCAACCAAG GTGAACAAGGCACAACAACAGGCTCAGGTTGCTAGAATGGCTGCTCGGGCACCACA
	Intron 1-2	38,034,162	38,032,526			1,637	gtatgcatcataggaccggtgaggg..........gcagcagcccctgccggtatggcag
2	BGIOSGA005295-TA.2	38,032,525	38,032,258	2	0	268	GTACGGCTGCCCCTACATCTCCTCCGCCTGCGTCCTCCTCACCTCGTACATCCTCTCGTG CGCCGATCTCCTCCTGCTCCTTCCCGTTGTTCCTCTCCCTCTTCTCGGCGGCCCTCTGCC GTGGACACAACAGCGCTCACACACAGCCCAGGTGGAGGAACAGCAGGCCAACGTCGCTGC CGTAGCGGTGGTGCAGGGTGTCCAACGAGCGGTGTGGGAGCTGGTCGACGAGGTGGAGGT GGCTGACGAAAGGAAGCAACGGCGGTGA
	3' downstream sequence						tggcagaagcttcccttttccaagactcttgattgtgaagacgactagga..........

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