Oryza sativa Indica Group (ASM465v1)
Description

Protein HIRA [Source:UniProtKB/TrEMBL;Acc:B8BEM7]

Location
About this transcript

This transcript has 9 exons, is annotated with 30 domains and features, is associated with 8 variant alleles and maps to 43 oligo probes.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-BGIOSGA031293-TA2805934aa
 
Protein coding
B8BEM7 Ensembl Canonical

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
CDD13320-cd00200-
PROSITE profiles80116-PS50294-
PROSITE profiles122153-PS50294-
Pfam8330CAF1B/HIR1, beta-propeller domainPF24105IPR055410 [Display all genes with this domain]
Pfam641838Protein HIRA-like, C-terminalPF07569IPR011494 [Display all genes with this domain]
PANTHER1906WD repeat HIR1-likePTHR13831IPR031120 [Display all genes with this domain]
SMART1453WD40 repeatSM00320IPR001680 [Display all genes with this domain]
PROSITE profiles2151WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART73112WD40 repeatSM00320IPR001680 [Display all genes with this domain]
PROSITE profiles80121WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART115154WD40 repeatSM00320IPR001680 [Display all genes with this domain]
PROSITE profiles122163WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART209281WD40 repeatSM00320IPR001680 [Display all genes with this domain]
SMART284324WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Superfamily14321WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
Superfamily210712WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
Gene3D5194WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
Gene3D198338WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite377392
MobiDBLite377450
MobiDBLite394404
MobiDBLite437450
MobiDBLite907934
MobiDBLite915924
Seg243257
Seg369392
Seg750759
Seg914926
Alphafold1934
Ncoils887907