Oryza sativa Indica Group (ASM465v1)
Description

GDP-mannose transporter (Fragment) [Source:Projected from Arabidopsis thaliana (AT2G13650) UniProtKB/TrEMBL;Acc:A0A1B0VP09]

Location
About this transcript

This transcript has 11 exons, is annotated with 29 domains and features, is associated with 66 variant alleles and maps to 29 oligo probes.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-BGIOSGA027786-TA2070689aa
 
Protein coding
B8BA38 Ensembl Canonical

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
Superfamily75174Chaperone J-domain superfamilySSF46565IPR036869 [Display all genes with this domain]
Gene3D79197Chaperone J-domain superfamily1.10.287.110IPR036869 [Display all genes with this domain]
SMART95170DnaJ domainSM00271IPR001623 [Display all genes with this domain]
CDD96167DnaJ domaincd06257IPR001623 [Display all genes with this domain]
Pfam96175DnaJ domainPF00226IPR001623 [Display all genes with this domain]
PROSITE profiles96178DnaJ domainPS50076IPR001623 [Display all genes with this domain]
Prints101119DnaJ domainPR00625IPR001623 [Display all genes with this domain]
Prints119134DnaJ domainPR00625IPR001623 [Display all genes with this domain]
Prints150170DnaJ domainPR00625IPR001623 [Display all genes with this domain]
PROSITE patterns155174DnaJ domain, conserved sitePS00636IPR018253 [Display all genes with this domain]
PANTHER9208J-protein Zuotin/DnaJC2PTHR43999IPR044634 [Display all genes with this domain]
Pfam389677Sugar phosphate transporter domainPF03151IPR004853 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite5893
MobiDBLite7193
MobiDBLite212316
MobiDBLite256272
Seg8395
Seg137150
Seg426440
TMHMM387409
TMHMM416438
TMHMM453475
TMHMM507524
TMHMM528550
TMHMM571593
TMHMM608630
TMHMM637656
TMHMM666684
Alphafold1689