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    Oryza sativa Indica Group (ASM465v1) ▼

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    Transcript: BGIOSGA026442-TA

    Location

    Chromosome 7: 27,592,253-27,596,620 forward strand.

    About this transcript

    This transcript has 6 exons, is annotated with 32 domains and features, is associated with 10 variant alleles and maps to 45 oligo probes.

    Gene

    This transcript is a product of gene BGIOSGA026442 Show transcript tableHide transcript table

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    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
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    NameTranscript IDbpProteinBiotypeUniProtFlags
    -BGIOSGA026442-TA31771058aa
     
    Protein coding
    		B8B6A7 Ensembl Canonical

    Domains & features

    Domains

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    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
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    Domain sourceStartEndDescriptionAccessionInterPro
    CDD55440-cd01491-
    Gene3D175463-3.40.50.12550-
    CDD4721011-cd01490-
    Gene3D473951-3.40.50.720-
    Pfam56430THIF-type NAD/FAD binding foldPF00899IPR000594 [Display all genes with this domain]
    Pfam453945THIF-type NAD/FAD binding foldPF00899IPR000594 [Display all genes with this domain]
    PANTHER62782ThiF/MoeB/HesA familyPTHR10953IPR045886 [Display all genes with this domain]
    Superfamily50438Ubiquitin-activating enzymeSSF69572IPR035985 [Display all genes with this domain]
    Superfamily448948Ubiquitin-activating enzymeSSF69572IPR035985 [Display all genes with this domain]
    NCBIFAM501058Ubiquitin-activating enzyme E1TIGR01408IPR018075 [Display all genes with this domain]
    TIGRFAM501058Ubiquitin-activating enzyme E1TIGR01408IPR018075 [Display all genes with this domain]
    SMART9311053Ubiquitin-activating enzyme E1, C-terminalSM00985IPR018965 [Display all genes with this domain]
    Pfam9641053Ubiquitin-activating enzyme E1, C-terminalPF09358IPR018965 [Display all genes with this domain]
    Gene3D9661056Ubiquitin-activating enzyme E1, C-terminal domain superfamily3.10.290.60IPR038252 [Display all genes with this domain]
    PROSITE patterns632640Ubiquitin-activating enzyme E1, Cys active sitePS00865IPR033127 [Display all genes with this domain]
    Pfam230300Ubiquitin-activating enzyme E1, FCCH domainPF16190IPR032418 [Display all genes with this domain]
    Gene3D218299Ubiquitin-activating enzyme E1, FCCH domain superfamily2.40.30.180IPR042302 [Display all genes with this domain]
    Gene3D625900Ubiquitin-activating enzyme E1, SCCH domain1.10.10.2660IPR042063 [Display all genes with this domain]
    PROSITE patterns415423Ubiquitin-activating enzyme E1, conserved sitePS00536IPR018074 [Display all genes with this domain]
    Pfam301371Ubiquitin-activating enzyme E1, four-helix bundlePF16191IPR032420 [Display all genes with this domain]
    Gene3D46164Ubiquitin-activating enzyme E1, inactive adenylation domain, subdomain 13.50.50.80IPR042449 [Display all genes with this domain]
    Pfam640893Ubiquitin-activating enzyme, SCCH domainPF10585IPR019572 [Display all genes with this domain]
    Prints77101Ubiquitin/SUMO-activating enzyme E1PR01849IPR000011 [Display all genes with this domain]
    Prints192219Ubiquitin/SUMO-activating enzyme E1PR01849IPR000011 [Display all genes with this domain]
    Prints500523Ubiquitin/SUMO-activating enzyme E1PR01849IPR000011 [Display all genes with this domain]
    Prints547572Ubiquitin/SUMO-activating enzyme E1PR01849IPR000011 [Display all genes with this domain]
    Prints701728Ubiquitin/SUMO-activating enzyme E1PR01849IPR000011 [Display all genes with this domain]

    Other features

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    • Feature type
    • Start
    • End
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    Feature typeStartEnd
    MobiDBLite1745
    Seg2436
    Seg534540
    Seg821838
    Alphafold11058

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