Transcript: BGIOSGA019224-TA

Description

E3 ubiquitin-protein ligase UPL6 [Source:Projected from Arabidopsis thaliana (AT3G17205) UniProtKB/Swiss-Prot;Acc:Q8RWB8]

Location

About this transcript

This transcript has 26 exons, is annotated with 11 domains and features, is associated with 74 variant alleles and maps to 53 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	BGIOSGA019224-TA	3153	1050aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8AYD7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	674	869	-	3.90.1750.10	-
Gene3D	936	1049	-	3.30.2410.10	-
CDD	714	1048	HECT domain	cd00078	IPR000569 [Display all genes with this domain]
SMART	733	1050	HECT domain	SM00119	IPR000569 [Display all genes with this domain]
PROSITE profiles	735	1050	HECT domain	PS50237	IPR000569 [Display all genes with this domain]
Pfam	771	949	HECT domain	PF00632	IPR000569 [Display all genes with this domain]
Superfamily	709	1042	HECT, E3 ligase catalytic domain	SSF56204	IPR035983 [Display all genes with this domain]
PANTHER	48	949	Ubiquitin-protein ligase E3A/B/C-like	PTHR45700	IPR044611 [Display all genes with this domain]

Domains & features