Oryza sativa Indica Group (ASM465v1) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 5: 3,433,722-3,439,210 reverse strand.
This transcript has 6 exons, is annotated with 18 domains and features, is associated with 12 variant alleles and maps to 37 oligo probes.
This transcript is a product of gene BGIOSGA018783 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| Superfamily | 34 | 83 | - | SSF57850 | - |
| PANTHER | 21 | 439 | E3 ubiquitin-protein ligase RFI2 | PTHR46798 | IPR044274 [Display all genes with this domain] |
| Pfam | 34 | 81 | Zinc finger, RING-type | PF13639 | IPR001841 [Display all genes with this domain] |
| SMART | 35 | 80 | Zinc finger, RING-type | SM00184 | IPR001841 [Display all genes with this domain] |
| PROSITE profiles | 35 | 81 | Zinc finger, RING-type | PS50089 | IPR001841 [Display all genes with this domain] |
| Gene3D | 19 | 86 | Zinc finger, RING/FYVE/PHD-type | 3.30.40.10 | IPR013083 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| MobiDBLite | 1 | 23 |
| MobiDBLite | 265 | 294 |
| MobiDBLite | 271 | 291 |
| MobiDBLite | 393 | 439 |
| MobiDBLite | 418 | 439 |
| Seg | 2 | 32 |
| Seg | 161 | 174 |
| Seg | 181 | 194 |
| Seg | 308 | 320 |
| Seg | 335 | 343 |
| Alphafold | 1 | 439 |
| Alphafold | 1 | 439 |
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Ensembl Plants release 60 - October 2024 © EMBL-EBI EMBL-EBI
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