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    Oryza sativa Indica Group (ASM465v1) ▼

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    Transcript: BGIOSGA018031-TA

    Location

    Chromosome 5: 21,941,959-21,945,714 reverse strand.

    About this transcript

    This transcript has 7 exons, is annotated with 32 domains and features, is associated with 133 variant alleles and maps to 45 oligo probes.

    Gene

    This transcript is a product of gene BGIOSGA018031 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • RefSeq
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
    -BGIOSGA018031-TA2475824aa
     
    Protein coding
    		B8AYD1 -Ensembl Canonical

    Domains & features

    Domains

    Show/hide columns
    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
    Download what you seeDownload whole table
    Domain sourceStartEndDescriptionAccessionInterPro
    Superfamily1575-SSF57850-
    PANTHER32816-PTHR44489-
    Gene3D225439-1.10.510.10-
    PROSITE profiles141440Protein kinase domainPS50011IPR000719 [Display all genes with this domain]
    Superfamily224438Protein kinase-like domain superfamilySSF56112IPR011009 [Display all genes with this domain]
    SMART522559WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam527559WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles529568WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART562603WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART609651WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam626651WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    SMART654691WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam658690WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles661690WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART694735WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART736773WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Superfamily527801WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
    Gene3D456606WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
    Gene3D609821WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
    SMART1767Zinc finger, RING-typeSM00184IPR001841 [Display all genes with this domain]
    PROSITE profiles1768Zinc finger, RING-typePS50089IPR001841 [Display all genes with this domain]
    PROSITE patterns3645Zinc finger, RING-type, conserved sitePS00518IPR017907 [Display all genes with this domain]
    Pfam1765Zinc finger, RING-type, eukaryoticPF13445IPR027370 [Display all genes with this domain]
    Gene3D1197Zinc finger, RING/FYVE/PHD-type3.30.40.10IPR013083 [Display all genes with this domain]

    Other features

    Show/hide columns
    • Feature type
    • Start
    • End
    Download what you seeDownload whole table
    Feature typeStartEnd
    MobiDBLite486505
    Seg818
    Seg4662
    Seg86115
    Seg131148
    Seg193207
    Seg256263
    Alphafold1824

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