Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: BGIOSGA013688-TA

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Location

Chromosome 3: 36,890,387-36,896,933 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 22 domains and features, is associated with 49 variant alleles and maps to 65 oligo probes.

Gene

This transcript is a product of gene BGIOSGA013688 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	BGIOSGA013688-TA	2235	744aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8AKX8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	95	158	-	1.20.1310.10	-
Gene3D	169	283	-	1.20.1310.10	-
Gene3D	284	386	-	1.20.1310.10	-
Gene3D	387	498	-	1.20.1310.10	-
Gene3D	503	659	-	3.30.230.130	-
PANTHER	154	740	Cullin	PTHR11932	IPR045093 [Display all genes with this domain]
PROSITE profiles	388	617	Cullin homology domain	PS50069	IPR016158 [Display all genes with this domain]
SMART	418	567	Cullin homology domain	SM00182	IPR016158 [Display all genes with this domain]
Superfamily	385	655	Cullin homology domain superfamily	SSF75632	IPR036317 [Display all genes with this domain]
SMART	673	738	Cullin protein, neddylation domain	SM00884	IPR019559 [Display all genes with this domain]
Pfam	676	736	Cullin protein, neddylation domain	PF10557	IPR019559 [Display all genes with this domain]
Superfamily	102	384	Cullin repeat-like-containing domain superfamily	SSF74788	IPR016159 [Display all genes with this domain]
Pfam	153	645	Cullin, N-terminal	PF00888	IPR001373 [Display all genes with this domain]
PROSITE patterns	717	744	Cullin, conserved site	PS01256	IPR016157 [Display all genes with this domain]
Superfamily	656	744	Winged helix DNA-binding domain superfamily	SSF46785	IPR036390 [Display all genes with this domain]
Gene3D	671	744	Winged helix-like DNA-binding domain superfamily	1.10.10.10	IPR036388 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	1	49
MobiDBLite	9	18
Seg	9	18
Seg	32	42
Seg	59	71
Alphafold	1	744

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