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Oryza sativa Indica Group (ASM465v1)
Location
About this transcript

This transcript has 10 exons, is annotated with 24 domains and features, is associated with 87 variant alleles and maps to 47 oligo probes.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-BGIOSGA007798-TA2547848aa
 
Protein coding
A2X2H1 Ensembl Canonical

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
Superfamily21173-SSF52402-
CDD45175-cd01989-
Gene3D470563-3.30.200.20-
Gene3D564771-1.10.510.10-
Superfamily768843-SSF57850-
CDD775829-cd16655-
PROSITE profiles491758Protein kinase domainPS50011IPR000719 [Display all genes with this domain]
SMART491758Protein kinase domainSM00220IPR000719 [Display all genes with this domain]
Pfam492746Protein kinase domainPF00069IPR000719 [Display all genes with this domain]
PROSITE patterns497518Protein kinase, ATP binding sitePS00107IPR017441 [Display all genes with this domain]
Superfamily472746Protein kinase-like domain superfamilySSF56112IPR011009 [Display all genes with this domain]
Gene3D14180Rossmann-like alpha/beta/alpha sandwich fold3.40.50.620IPR014729 [Display all genes with this domain]
PROSITE patterns609621Serine/threonine-protein kinase, active sitePS00108IPR008271 [Display all genes with this domain]
PROSITE profiles773846U-box domainPS51698IPR003613 [Display all genes with this domain]
Pfam774842U-box domainPF04564IPR003613 [Display all genes with this domain]
SMART777839U-box domainSM00504IPR003613 [Display all genes with this domain]
PANTHER397843U-box domain-containing ubiquitin ligasesPTHR45647IPR051348 [Display all genes with this domain]
Pfam16168UspAPF00582IPR006016 [Display all genes with this domain]
Gene3D772847Zinc finger, RING/FYVE/PHD-type3.30.40.10IPR013083 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
Seg657
Seg7392
Seg104109
Alphafold1848
Ncoils420444