Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: BGIOSGA004578-TA

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Description

FH [Source:Projected from Arabidopsis thaliana (AT4G03240) UniProtKB/TrEMBL;Acc:A0A178V3B4]

Location

Chromosome 1: 36,587,643-36,589,820 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 24 domains and features, is associated with 90 variant alleles and maps to 45 oligo probes.

Gene

This transcript is a product of gene BGIOSGA004578 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	BGIOSGA004578-TA	594	197aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8AAG1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
CDD	88	196	-	cd00503	-
NCBIFAM	90	187	Frataxin	TIGR03422	IPR017789 [Display all genes with this domain]
TIGRFAM	90	187	Frataxin	TIGR03422	IPR017789 [Display all genes with this domain]
PROSITE patterns	138	152	Frataxin conserved site	PS01344	IPR020895 [Display all genes with this domain]
PANTHER	12	197	Frataxin/CyaY	PTHR16821	IPR002908 [Display all genes with this domain]
Prints	86	104	Frataxin/CyaY	PR00904	IPR002908 [Display all genes with this domain]
PROSITE profiles	86	194	Frataxin/CyaY	PS50810	IPR002908 [Display all genes with this domain]
SMART	86	197	Frataxin/CyaY	SM01219	IPR002908 [Display all genes with this domain]
Pfam	87	193	Frataxin/CyaY	PF01491	IPR002908 [Display all genes with this domain]
NCBIFAM	88	195	Frataxin/CyaY	TIGR03421	IPR002908 [Display all genes with this domain]
TIGRFAM	88	195	Frataxin/CyaY	TIGR03421	IPR002908 [Display all genes with this domain]
Prints	124	139	Frataxin/CyaY	PR00904	IPR002908 [Display all genes with this domain]
Prints	139	154	Frataxin/CyaY	PR00904	IPR002908 [Display all genes with this domain]
Gene3D	79	197	Frataxin/CyaY superfamily	3.30.920.10	IPR036524 [Display all genes with this domain]
Superfamily	84	194	Frataxin/CyaY superfamily	SSF55387	IPR036524 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
Phobius	1	5
Phobius	1	18
Phobius	6	13
Phobius	14	18
Phobius	19	197
Seg	32	45
Seg	69	82
SignalP GRAM POSITIVE	1	41
Alphafold	1	197

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