Oryza sativa Indica Group (ASM465v1) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 1: 15,904,346-15,908,188 reverse strand.
This transcript has 9 exons, is annotated with 16 domains and features, is associated with 45 variant alleles and maps to 42 oligo probes.
This transcript is a product of gene BGIOSGA001682 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| PANTHER | 39 | 492 | - | PTHR12606 | - |
| Gene3D | 257 | 495 | - | 3.40.395.10 | - |
| Superfamily | 264 | 496 | Papain-like cysteine peptidase superfamily | SSF54001 | IPR038765 [Display all genes with this domain] |
| PROSITE profiles | 297 | 467 | Ulp1 protease family, C-terminal catalytic domain | PS50600 | IPR003653 [Display all genes with this domain] |
| Pfam | 311 | 491 | Ulp1 protease family, C-terminal catalytic domain | PF02902 | IPR003653 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| MobiDBLite | 1 | 146 |
| MobiDBLite | 19 | 34 |
| MobiDBLite | 47 | 61 |
| MobiDBLite | 95 | 110 |
| MobiDBLite | 127 | 145 |
| Seg | 19 | 108 |
| Seg | 159 | 175 |
| Seg | 182 | 203 |
| Seg | 322 | 332 |
| Alphafold | 1 | 497 |
| Ncoils | 181 | 202 |
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Ensembl Plants release 60 - October 2024 © EMBL-EBI EMBL-EBI
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