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Oryza sativa Indica Group (ASM465v1) ▼

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About Oryza sativa Indica

Oryza sativa Indica is one of the two most commonly cultivated sub-species of rice (along with O. sativa Japonica) and is the most widely grown in the hot climates of Southern Asia. The genome of Indica is very similar to that of Japonica, which is generally restricted to temperate climes such as Japan.

Taxonomy ID 39946

Data source Beijing Genomics Institute

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Genome assembly: ASM465v1

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Example geneExample transcript

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

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Example gene tree

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

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Phylogenetic overview of gene families

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Example variant

Variation

What can I find? Short sequence variants.

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Variant Effect Predictor

Regulation

What can I find? Microarray annotations.

More about the Ensembl Plants microarray annotation strategy