Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: ORGLA12G0019500.1

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Location

Chromosome 12: 1,490,630-1,493,343 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 28 domains and features, is associated with 31 variant alleles and maps to 46 oligo probes.

Gene

This transcript is a product of gene ORGLA12G0019500 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ORGLA12G0019500.1	2031	676aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I1R3T9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Exons

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Download sequence

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence

Markup

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No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........cccacctcgctccccgagcagcagctgagctcccaatccggcaatccgcc
1	ORGLA12G0019500.1.exon1	1,490,630	1,491,855	0	2	1,226	ATGCCCGCCGCCGAGAGCTGCCACTCCCGCAGCCTCTCGTGGCTCGTCAAGTCCTGCATC CCCGCCGACCCCGCCCGCCACATCGCCGTCCCCGTTCTTTGCCCCACCCCGCAACCGCCG CCTCCCTCGTCGCCGCCGGCATCCCCAATCTCCGCCCTCCCCGACGACCTCCTCCTCGAG TGCCTCGCCCGCGTCCCCCGCGCCTCCATCCCTCCGCTCCCCGCCGTCTCCCGCCGCTTC GCCACGCTCCTCGCCTCCGACGCCTTCCTCCACCTCCGCCGCGCCCACGCCCACCTCCGC CCCTCCCTCCTCGCCCTCTCCGTCTCCGACAACGGCTGCATCGCGCAGGCGCTGCTCCGG TTTGAATCCTCCGTGCCCGTGCTCGAGGTCGCCGCGCTGCCGTTGCCCCCGACCCTGCTG CATTGCGGCGGCTCCGTGTTCGCGCACGCCCGCGCGGTCGTGCTGGGTCGGGATGTCTTC CTCATCGGCCGCGGGGCGACGCTGCGCGTCGACGCGCTCACCGGCGCGGCCCGCGCGTGC GCGCCCACGCTCTTCCCGCGGAAGAAGTTCGCCGCTGCCGCCGTGGGCGACCGGATCTAC GTCGCCGGCGGGTCCGCGCGCACCGCGGTGGTCGAGGAGTACGACCCGGAGGCTGACGCG TGGCGCGTGGTCGGCGAGGCGCCGCGGCGGAGGTACGGGTGCGCCGGCGCGAGCGCGGGA GGCGTGTTCTACGTCGCCGGGGGCGTCGCGGTGTCCGGCGAGGGCGCGCGGGCGCTCGAG GCGCACGTATGCGCCGGGTCGGTGGACGCGCTGCACGTCGCGTCCGGCGCCTGGGCGCGC CCCCGTGCGCTCCCCGGCGGCGGCTGCGTCGTGGGGGCGTGCGGCGTCGGTGACCACCTG TACATGGTGGCGAGCCACGCGGTGGAGCTCTCCTTCTGGAGGTGGTGCGGCGCCACCGGC CGTGGCGGTGACGGCAGAGGCTGGGGCGGGTGGGTGGCGCTTGAGGCGCCGCCGATGCCG AGGGGGTCGGTGGGGCTCGGCATGGCGGTGCGCGTGGCGATGGCCGGCCTAGGAACCAAC AGGGTGGCGGCCGTGGTGAGCGCTGCGGCCGTGAGGGGTCACAATGCCGGCGGCGGCGCG TTGGAAGGGATGGTGCTGGTGTACGACATCGCCGGCGGCAAGTGGAGCCGCGCGCCGGAC CTGCCGCCAGGGTTCCGCCGCGCCGC
	Intron 1-2	1,491,856	1,492,378			523	gtgcgccggcgtcgagtgctgagaa..........ttgtactccatttacattgttcaag
2	ORGLA12G0019500.1.exon2	1,492,379	1,492,448	2	0	70	CTTGCAAAATGCAATGTGGTCCTCTTCCTGCTTCATAAATCACGATGAACGCGAACCACG TGATTGCACG
	Intron 2-3	1,492,449	1,492,608			160	gtgagcatttgcgcaagaatatatc..........acgcactctcgccatccaaattcag
3	ORGLA12G0019500.1.exon3	1,492,609	1,493,343	0	0	735	AATCGATTCGGATCAGCTTCTACCAACTCCGCCTTAAATTTTGTCACGCCATTTCAACTC ATACGCCGCTCGCATCGCAGCTCGTTCGTGCCACTGTCCAGCCGCAAGCCCCACTTCCCT GCAGCTGCTGTCTCCATCTCTTCCATTTTATTTGCTCACACTGAAATGCACGCGCGACTG CTGCTACGAATGCACGCGCCCATCTCCTTCGCGCCCGCATCTTCGCCCGACGCCGCCTCC TTCGCGCCCGCCGCAGCGGACGTCGGCGGCGCCGTGTGCCTCGGCTACGGCATCGCCATC GCCGTCGGCGTCCTCGTCTTCATCTCCACCGTCATGCTCGCCTCCTACATCTGCGTCCGC GCCAAGGCCGGCGCAGCTGCCGTGCTCCTCGCCGACGACGACGACGACGGCGGCGCCCCG GCAGCGTCCGCCGTCGTGGTGCTAGGCCTCGACGGCCCCGCCATCGACGCGCTCTACCCC AAGTTCCTACACGTCGGCGTCGGTGACGACGACAACGCGTGCGCGGGGGCGCAGTGCGCC ATCTGCCTCGGGGAGTTCGTGGCCGGCGACGCGCTCCGGCGAGGGCCCGGGTGCGGGCAC CGGTTCCACGCGGAGTGCGTGGAGCGGTGGCTGCGGGTGAGCGCCACCTGCCCGGTGTGC CGCGACTCGCCGCTGCCGTCGCCGATGGCCACGCCGCTCGCGGAGGCCATGCCCCTCGCT GCGCACGCTCGATGA
	3' downstream sequence						cacagccacacaggttcacatgtcacatatgttactgtgctctgtagaca..........

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