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Oryza glaberrima (Oryza_glaberrima_V1)
Location
About this transcript

This transcript has 1 exon, is annotated with 22 domains and features, is associated with 20 variant alleles and maps to 29 oligo probes.

Gene
Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-ORGLA08G0032300.11368455aa
 
Protein coding
I1QFX2 Ensembl Canonical
Exons/ Introns
  • Translated sequence
  • Flanking sequence
Markup
  • loading
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  • No.
  • Exon / Intron
  • Start
  • End
  • Start Phase
  • End Phase
  • Length
  • Sequence
No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
5' upstream sequence
..........tggtctcgggtggatccgcttagctttggttcttttgctggttggagggc
1ORGLA08G0032300.1.exon12,748,2502,746,883001,368
ATGGCGGCGGAGTCGTCGGCTGCTGCTGCTGCGGGCGGGGGCGAGAGGAGGGGCCCGATG
GATCTGAACCTGTATCTCGGCCTCCCTCCGCTGCCGCCGCCTCCGGGAAGGCTGGATGTC
GCCGCCGATTACCCGTCGCTGCTGCTGAACTCCGCCGCCACGGTGGCGAACGAGCAAAGG
GGCTCGGTGGTGGTGGCGGCACCGCCTCCGGCGGCGGCGGCGTACTCGCCGTCGAACGCG
CTGTCAGCGCCGGAGCAGGTGCTGGTAGATCCTGTTGCAGCGTGGCTTGTCGATCCCGGT
GAGCAGCAGCCGGTGCCGCCGCTCGAGACGCCATCGTACATGGCCAGGGCCTCGTCGACG
CTGCCACAGATTTTTGCTTGTGCAGCGTTGGAAATGCTTGTGCAGACCGGTCGAGCAATC
CCACCTACTGGTCTTATAAGGGGAGCAGAGATTGCTGCTGCAAGCCGCCCTATGACGCCG
GAGAATCGGCTGCGGAGGTTGATCCAGGTGAGCGATCAACACGGCGTCGGGAATGGGAGG
GCGGGGCCTGGGCCAGTGAGCCGCAGCCGACGGGCGAATAGCCCGGAAGCCGATAATCTG
GCGCGGGCCATCCAGAGGTCTCATAATTCTCTTGAGGCATCAAGGAGGCAGATGCTTGAT
GGTGATGGCAGTGATGCCACCAAGAAGGATGACGGTTGCGGATGCAACGGCAGCTTCGAA
TGCAATATCTGCTTTGAATCAGCTAAAGATCCTGTGGTTACCCCTTGTGGCCACCTCTTC
TGCTGGCCTTGCATATACCAGTGGCTTCATGGACATTCAGAGCACTCTGATTGCCCTGTC
TGCAAGGGCAAGGTGCTCGAGGTAAACGTCACGCCGATTTATGGAAGAGGAGGTGGCGAG
GAGAACTCCTCCAGAAATGATATCCAAATCCCTCCCAGGCCGAGTGCGCAGAGGACCGAG
AGCTTGAGGCAGCAGCTGCAAAGGCCAGACACAAGAGGAGGCATTGCAAACATGGTGAGG
CGGTTGATGCAAAACCAAGATATAGTGGCAGGCCAGGCGGCTTCATCTGCACCCCGGCCG
AGGGGTAGGGGTCGAAGGCAGGCAAGACAAGATGCGCCTTCTGCACCAGCAACACAGCAG
CAGGTGGTCAATGCTGATGCTGGGAGTGGCAATCAGGCTCCTTTGCCACCTCCTGATGCT
AATGGAGCTGCACCGGCTGCTGCTGTCGCTCCCCAACAGTCATCATCTGTGGAGCAAGCG
TCGACTTCTAGCACCGTGGGTGTTATAGCGGGAGGGCCAGCACAAGGTAGGAGGTCAAGA
GTTTCTGAATCCACCCCTGCAAGGAGGACAAGGAGGAGGCATCAGTAG            
3' downstream sequence
gtaacttagagttgttactgtaatagaacatatacaccatgtttccttgt..........