Oryza glaberrima (Oryza_glaberrima_V1)
Location
About this transcript

This transcript has 11 exons, is annotated with 24 domains and features, is associated with 23 variant alleles and maps to 35 oligo probes.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-ORGLA12G0152200.11461486aa
 
Protein coding
I1R7L6 Ensembl Canonical

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
Pfam4155-PF23625-
Pfam7084-PF23625-
Gene3D110177-2.10.110.10-
Superfamily113144-SSF57716-
CDD119171-cd09396-
Superfamily145200-SSF57716-
PANTHER3485Protein DA1-likePTHR24209IPR045218 [Display all genes with this domain]
Pfam268481Protein DA1-like domainPF12315IPR022087 [Display all genes with this domain]
PROSITE profiles4059Ubiquitin interacting motifPS50330IPR003903 [Display all genes with this domain]
SMART4059Ubiquitin interacting motifSM00726IPR003903 [Display all genes with this domain]
PROSITE profiles7089Ubiquitin interacting motifPS50330IPR003903 [Display all genes with this domain]
SMART7089Ubiquitin interacting motifSM00726IPR003903 [Display all genes with this domain]
PROSITE profiles117177Zinc finger, LIM-typePS50023IPR001781 [Display all genes with this domain]
SMART118170Zinc finger, LIM-typeSM00132IPR001781 [Display all genes with this domain]
PROSITE patterns119153Zinc finger, LIM-typePS00478IPR001781 [Display all genes with this domain]
Pfam119173Zinc finger, LIM-typePF00412IPR001781 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite2031
MobiDBLite2040
MobiDBLite83104
Seg317330
Seg405427
Alphafold1486
Alphafold1486
Alphafold1486