Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: ORGLA12G0152200.1

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Location

Chromosome 12: 17,124,925-17,128,257 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 24 domains and features, is associated with 23 variant alleles and maps to 35 oligo probes.

Gene

This transcript is a product of gene ORGLA12G0152200 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ORGLA12G0152200.1	1461	486aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I1R7L6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Pfam	41	55	-	PF23625	-
Pfam	70	84	-	PF23625	-
Gene3D	110	177	-	2.10.110.10	-
Superfamily	113	144	-	SSF57716	-
CDD	119	171	-	cd09396	-
Superfamily	145	200	-	SSF57716	-
PANTHER	3	485	Protein DA1-like	PTHR24209	IPR045218 [Display all genes with this domain]
Pfam	268	481	Protein DA1-like domain	PF12315	IPR022087 [Display all genes with this domain]
PROSITE profiles	40	59	Ubiquitin interacting motif	PS50330	IPR003903 [Display all genes with this domain]
SMART	40	59	Ubiquitin interacting motif	SM00726	IPR003903 [Display all genes with this domain]
PROSITE profiles	70	89	Ubiquitin interacting motif	PS50330	IPR003903 [Display all genes with this domain]
SMART	70	89	Ubiquitin interacting motif	SM00726	IPR003903 [Display all genes with this domain]
PROSITE profiles	117	177	Zinc finger, LIM-type	PS50023	IPR001781 [Display all genes with this domain]
SMART	118	170	Zinc finger, LIM-type	SM00132	IPR001781 [Display all genes with this domain]
PROSITE patterns	119	153	Zinc finger, LIM-type	PS00478	IPR001781 [Display all genes with this domain]
Pfam	119	173	Zinc finger, LIM-type	PF00412	IPR001781 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	20	31
MobiDBLite	20	40
MobiDBLite	83	104
Seg	317	330
Seg	405	427
Alphafold	1	486
Alphafold	1	486
Alphafold	1	486

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