Oryza glaberrima (Oryza_glaberrima_V1)
Description

Ubiquitinyl hydrolase 1 [Source:UniProtKB/TrEMBL;Acc:I1QQ76]

Location
About this transcript

This transcript has 1 exon, is annotated with 34 domains and features, is associated with 21 variant alleles and maps to 9 oligo probes.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-ORGLA09G0120500.12781926aa
 
Protein coding
I1QQ76 Ensembl Canonical

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
Superfamily124189-SSF57850-
Gene3D217409-3.90.70.10-
Superfamily223676Papain-like cysteine peptidase superfamilySSF54001IPR038765 [Display all genes with this domain]
Pfam225383Peptidase C19, ubiquitin carboxyl-terminal hydrolasePF00443IPR001394 [Display all genes with this domain]
PANTHER64677Ubiquitin carboxyl-terminal hydrolasesPTHR24006IPR050164 [Display all genes with this domain]
PROSITE profiles225510Ubiquitin specific protease domainPS50235IPR028889 [Display all genes with this domain]
PROSITE patterns226241Ubiquitin specific protease, conserved sitePS00972IPR018200 [Display all genes with this domain]
Gene3D60203Zinc finger, RING/FYVE/PHD-type3.30.40.10IPR013083 [Display all genes with this domain]
PROSITE profiles89210Zinc finger, UBP-typePS50271IPR001607 [Display all genes with this domain]
Pfam131190Zinc finger, UBP-typePF02148IPR001607 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite113
MobiDBLite166
MobiDBLite1560
MobiDBLite94110
MobiDBLite94127
MobiDBLite372409
MobiDBLite392408
MobiDBLite433444
MobiDBLite433473
MobiDBLite454464
MobiDBLite526625
MobiDBLite784853
MobiDBLite790801
MobiDBLite802814
MobiDBLite815828
MobiDBLite843853
MobiDBLite884926
MobiDBLite892919
Seg1543
Seg4960
Seg101129
Seg375392
Seg445464
Alphafold1926