Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: ORGLA08G0057900.1

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Location

Chromosome 8: 5,465,300-5,466,391 forward strand.

About this transcript

This transcript has 1 exon, is annotated with 14 domains and features, is associated with 43 variant alleles and maps to 20 oligo probes.

Gene

This transcript is a product of gene ORGLA08G0057900 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ORGLA08G0057900.1	1092	363aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I1QGM8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Superfamily	18	154	-	SSF49599	-
CDD	177	292	-	cd18280	-
Gene3D	295	362	-	1.25.40.420	-
PANTHER	10	358	BTB/POZ and MATH domain-containing protein 1-6	PTHR26379	IPR045005 [Display all genes with this domain]
Pfam	181	294	BTB/POZ domain	PF00651	IPR000210 [Display all genes with this domain]
PROSITE profiles	191	258	BTB/POZ domain	PS50097	IPR000210 [Display all genes with this domain]
SMART	191	296	BTB/POZ domain	SM00225	IPR000210 [Display all genes with this domain]
PROSITE profiles	19	151	MATH/TRAF domain	PS50144	IPR002083 [Display all genes with this domain]
CDD	20	152	MATH/TRAF domain	cd00121	IPR002083 [Display all genes with this domain]
Pfam	21	149	MATH/TRAF domain	PF22486	IPR002083 [Display all genes with this domain]
Gene3D	166	290	SKP1/BTB/POZ domain superfamily	3.30.710.10	IPR011333 [Display all genes with this domain]
Superfamily	170	293	SKP1/BTB/POZ domain superfamily	SSF54695	IPR011333 [Display all genes with this domain]
Gene3D	18	155	TRAF-like	2.60.210.10	IPR008974 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
Alphafold	1	363

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