Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: ORGLA07G0130300.1

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Location

Chromosome 7: 14,729,632-14,736,360 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 24 domains and features, is associated with 79 variant alleles and maps to 44 oligo probes.

Gene

This transcript is a product of gene ORGLA07G0130300 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ORGLA07G0130300.1	1938	645aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I1QB11	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
CDD	10	293	-	cd18008	-
Superfamily	389	436	-	SSF57850	-
Pfam	391	431	-	PF13923	-
CDD	473	600	-	cd18793	-
PROSITE profiles	1	221	Helicase superfamily 1/2, ATP-binding domain	PS51192	IPR014001 [Display all genes with this domain]
Pfam	475	589	Helicase, C-terminal	PF00271	IPR001650 [Display all genes with this domain]
PROSITE profiles	475	635	Helicase, C-terminal	PS51194	IPR001650 [Display all genes with this domain]
SMART	506	589	Helicase, C-terminal	SM00490	IPR001650 [Display all genes with this domain]
Superfamily	12	273	P-loop containing nucleoside triphosphate hydrolase	SSF52540	IPR027417 [Display all genes with this domain]
Superfamily	295	644	P-loop containing nucleoside triphosphate hydrolase	SSF52540	IPR027417 [Display all genes with this domain]
Gene3D	305	645	P-loop containing nucleoside triphosphate hydrolase	3.40.50.300	IPR027417 [Display all genes with this domain]
Pfam	12	367	SNF2, N-terminal	PF00176	IPR000330 [Display all genes with this domain]
Gene3D	3	91	SNF2-like, N-terminal domain superfamily	3.40.50.10810	IPR038718 [Display all genes with this domain]
Gene3D	94	248	SNF2-like, N-terminal domain superfamily	3.40.50.10810	IPR038718 [Display all genes with this domain]
PANTHER	9	644	SNF2/RAD54 Helicase and Transcription Factor	PTHR45626	IPR050628 [Display all genes with this domain]
SMART	392	431	Zinc finger, RING-type	SM00184	IPR001841 [Display all genes with this domain]
PROSITE profiles	392	432	Zinc finger, RING-type	PS50089	IPR001841 [Display all genes with this domain]
PROSITE patterns	407	416	Zinc finger, RING-type, conserved site	PS00518	IPR017907 [Display all genes with this domain]
Gene3D	383	456	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	113	161
MobiDBLite	133	150
Seg	149	159
SignalP	1	26
Alphafold	1	645

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