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    Oryza glaberrima (Oryza_glaberrima_V1) ▼

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    Transcript: ORGLA06G0166400.1

    Location

    Chromosome 6: 17,421,938-17,429,120 reverse strand.

    About this transcript

    This transcript has 7 exons, is annotated with 25 domains and features, is associated with 100 variant alleles and maps to 18 oligo probes.

    Gene

    This transcript is a product of gene ORGLA06G0166400 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtFlags
    -ORGLA06G0166400.11038345aa
     
    Protein coding
    		I1Q3F1 Ensembl Canonical

    Domains & features

    Domains

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    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
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    Domain sourceStartEndDescriptionAccessionInterPro
    PANTHER7299-PTHR19877-
    CDD54299-cd00200-
    PROSITE profiles5789-PS50294-
    PROSITE profiles266300-PS50294-
    Prints7690G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints161175G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints285299G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    SMART547WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam1142WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    SMART5089WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam5489WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles5798WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART92130WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam95130WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    SMART134174WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART177214WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam178214WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    SMART217256WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART259298WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam263297WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles266300WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    Superfamily5302WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
    Gene3D9316WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

    Other features

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    • Feature type
    • Start
    • End
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    Feature typeStartEnd
    Seg335342
    Alphafold1345

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