Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: ORGLA05G0145200.1

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Location

Chromosome 5: 15,832,293-15,836,560 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 25 domains and features, is associated with 71 variant alleles and maps to 20 oligo probes.

Gene

This transcript is a product of gene ORGLA05G0145200 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ORGLA05G0145200.1	777	258aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I1PVQ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	11	257	Alfin	PTHR12321	IPR045104 [Display all genes with this domain]
Pfam	13	140	Alfin, N-terminal	PF12165	IPR021998 [Display all genes with this domain]
CDD	204	254	Alfin1-like, PHD finger	cd15613	IPR044104 [Display all genes with this domain]
Superfamily	194	254	Zinc finger, FYVE/PHD-type	SSF57903	IPR011011 [Display all genes with this domain]
PROSITE profiles	202	254	Zinc finger, PHD-finger	PS50016	IPR019787 [Display all genes with this domain]
Pfam	205	251	Zinc finger, PHD-finger	PF00628	IPR019787 [Display all genes with this domain]
SMART	204	252	Zinc finger, PHD-type	SM00249	IPR001965 [Display all genes with this domain]
PROSITE patterns	205	251	Zinc finger, PHD-type, conserved site	PS01359	IPR019786 [Display all genes with this domain]
Gene3D	194	253	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
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End

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Feature type	Start	End
MobiDBLite	143	205
MobiDBLite	152	165
MobiDBLite	184	200
Phobius	1	91
Phobius	92	113
Phobius	114	258
Seg	65	77
Seg	174	201
Alphafold	1	258
Alphafold	1	258
Alphafold	1	258
Alphafold	1	258
Alphafold	1	258
Alphafold	1	258
Alphafold	1	258
Alphafold	1	258

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