We need your help! Has Ensembl saved you time or effort? Please take 15 minutes to fill in a survey and help EMBL-EBI make the case for why open data resources are critical to life science research.
https://www.surveymonkey.com/r/QGFMBH8?channel=[webpage]

Oryza glaberrima (Oryza_glaberrima_V1)
Description

Transducin/WD40 repeat-like superfamily protein [Source:Projected from Arabidopsis thaliana (AT1G10580) TAIR;Acc:AT1G10580]

Location
About this transcript

This transcript has 1 exon, is annotated with 35 domains and features, is associated with 23 variant alleles and maps to 28 oligo probes.

Gene
Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-ORGLA03G0191200.11719572aa
 
Protein coding
I1PC16 Ensembl Canonical

Domains

Show/hide columns
  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
CDD274572-cd00200-
PROSITE profiles278312-PS50294-
PROSITE profiles322359-PS50294-
PROSITE profiles408440-PS50294-
Prints298312G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
Prints341355G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
Prints427441G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
PANTHER1572Pre-mRNA-processing factor 17PTHR43979IPR032847 [Display all genes with this domain]
SMART271311WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam273311WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles278320WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART315354WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam317354WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles322363WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART357398WD40 repeatSM00320IPR001680 [Display all genes with this domain]
SMART401440WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam403439WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles408440WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART444483WD40 repeatSM00320IPR001680 [Display all genes with this domain]
SMART489530WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam494530WD40 repeatPF00400IPR001680 [Display all genes with this domain]
SMART533572WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam537572WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE patterns298312WD40 repeat, conserved sitePS00678IPR019775 [Display all genes with this domain]
Superfamily269572WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
Gene3D257572WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

Other features

Show/hide columns
  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite137
MobiDBLite135257
MobiDBLite195235
Seg1020
Seg4355
Seg212232
Alphafold1572
Alphafold1572
Alphafold1572