Oryza glaberrima (Oryza_glaberrima_V1) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationExternal ReferencesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 2: 27,136,264-27,137,550 reverse strand.
This transcript has 1 exon, is annotated with 22 domains and features, is associated with 10 variant alleles and maps to 23 oligo probes.
This transcript is a product of gene ORGLA02G0307100 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| PANTHER | 28 | 356 | - | PTHR45768 | - |
| Superfamily | 98 | 171 | - | SSF57850 | - |
| CDD | 122 | 165 | - | cd16461 | - |
| Pfam | 122 | 165 | Zinc finger, RING-type | PF13639 | IPR001841 [Display all genes with this domain] |
| SMART | 123 | 164 | Zinc finger, RING-type | SM00184 | IPR001841 [Display all genes with this domain] |
| PROSITE profiles | 123 | 165 | Zinc finger, RING-type | PS50089 | IPR001841 [Display all genes with this domain] |
| Gene3D | 81 | 170 | Zinc finger, RING/FYVE/PHD-type | 3.30.40.10 | IPR013083 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| MobiDBLite | 239 | 260 |
| MobiDBLite | 247 | 256 |
| MobiDBLite | 283 | 337 |
| MobiDBLite | 286 | 302 |
| Phobius | 1 | 34 |
| Phobius | 35 | 56 |
| Phobius | 57 | 428 |
| Seg | 4 | 22 |
| Seg | 35 | 48 |
| Seg | 51 | 69 |
| Seg | 247 | 260 |
| Seg | 285 | 301 |
| Seg | 333 | 347 |
| TMHMM | 34 | 56 |
| Alphafold | 1 | 428 |
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