Oryza brachyantha (Oryza_brachyantha.v1.4b) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 2: 19,301,493-19,306,666 forward strand.
This transcript has 6 exons and is annotated with 22 domains and features.
This transcript is a product of gene OB02G33760 Show transcript tableHide transcript table
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| No. | Exon / Intron | Start | End | Start Phase | End Phase | Length | Sequence |
|---|---|---|---|---|---|---|---|
| 5' upstream sequence |
..........tccccttccgccccttcgcagaaattcaaactcaaagcctgcgctcctcc
| ||||||
| 1 | OB02G33760.1.exon1 | 19,301,493 | 19,301,520 | - | - | 28 |
GGCGCCGATCTGCTCCAAGGAGGCCACC
|
| Intron 1-2 | 19,301,521 | 19,301,540 | 20 |
gcaccacccggagcaagccg
| |||
| 2 | OB02G33760.1.exon2 | 19,301,541 | 19,301,629 | 0 | 2 | 89 |
ATGGCCTCCACCAAGGAAGCCTACCGCGTCGAGCTCCGAGCTGCCGTCCGCCAGCTCGGC GACCGCGGCCTCTACTCCGCCGCCAAATG |
| Intron 2-3 | 19,301,630 | 19,301,708 | 79 |
gtacgcgccccccctaaaacccacc..........cgccgcctcctccccctccttgcag
| |||
| 3 | OB02G33760.1.exon3 | 19,301,709 | 19,302,078 | 2 | 0 | 370 |
GGCGGCCGAGCTGCTGGTCGGCATCGAGCCGGACGCCACACCGTCACCGTCGGTGGTGAT GGACACCCCATCCTCGTTGGGCTCTGCCGCATCCGGCGGGCGCCTTCTGCCCCTTCGCCG CAGCGGCGGGTCCAGCTTCCGCCGCCGCCTCCGGCCGGGCGGGGGCGCGGCCGACGCCGG GACGCCGCTCGGCGGCGTCTCGTACGTAAGCACGCCCATCCCCGACGACGACGCGTTCGA TGCGGGGGCTGACAAGTACCTGCTCGCCAAGACCTACTTCGACTGCCGTGAGTACCGGCG CGCCGCTCACGTGCTGCGCGGCCAGACCGGCCGCAAGGCCGTTTTCCTTCGGTGCTATGC CCTCTACATG |
| Intron 3-4 | 19,302,079 | 19,304,228 | 2,150 |
gtgagtttggatggtattgcctttt..........tgatcatagttatcttctcttttag
| |||
| 4 | OB02G33760.1.exon4 | 19,304,229 | 19,305,479 | 0 | 0 | 1,251 |
GCTGGAGAGAAGCGGAAAGAGGAAGAAACAGTCGAGCTTGAAGGATCTCTGGGAAAAAGC AATGTTGTTAATCAGGAACTAGTTGCATTGGAGAGAGAGCTCTCAACACATCGGAGGACT GGTGCTATTGATTCATTTAGTTTGTACTTGTATGGCATTGTTCTACGTGATAAAGGCAGT GAAGCTCTAGCTAGAACAGTTCTGGTGGAATCTGTCAACAACTACCCTTGGAACTGGAGC GCTTGGTTAGAGTTACAATATCTCTGCACTAGTAGTGATATTTTGAATAACTTAAATCTC AAGAATCACTGGATGAAAGATTTCTTCCTTGCTAGTGCACATTTGGAATTAAAGATGCAT GAAGAAGCTTTGAAAAGATATGAACGTTTAATGGGGGTCTTCCGTTGCAGTGACTACATT CAGGCCCAAATAGCAACCGTGCAGTATAGCATGAGAGACCTCGATGAAGCTGACATGATT TTTGAAGAACTCCTTAGGACCGATCCTTTCCGTGTGGATTCTATGGACGTTTACTCAAAT TTATTGTATGCAAAAGAAAGCTCAACCGCTTTAAGTTTCCTTGCTCACAGAGTATTTTTG ACAGATAAATATCGCCCAGAATCATGCTGCATAATCGCAAATTACTACAGTTTGAAGGGG CAGCATGAAAAATCAGTTTTGTACTTTCAGAGGGCACTTAAGCTTAATCGAAAGTATCTT TCAGCTTGGACTCTTATGGGACATGAGTTTGTTGAGCTAAAAAATACACCTGCTGCGATT GATGCATACAGGCGAGCTGTTGATATAAATCCCAGAGACTATCGTGCTTGGTATGGTCTT GGTCAGATCTATGAGATGATGGGAATGCCATTTTATGCACTTTATTACTTCCGTAAGTCA TCATACCTACAACCTAATGATGCTCGGCTTTGGAATGCTATGGCTCAGTGCTATGAAAGC GATCAACTTCAAATGATTGAAGATGCCATCAAGTGCTACGAGAGGTCTGCAAATAATAAT GATACTGAAGGAATAGCACTTCACCAGCTAGCAAAGTTACATGGTATGCTTGGACAATCA GAGGAGGCTGCATTTTACTACAAGAAGGATTTAGAGAGAATGGAAGTTGAGGAAAGGCAG GGTCAAAATTTTGTTGAAGCTCTGCTTTTCCTTGCAAAGCATTGCAAGAGCATAGGCAGG TTTGAGGAAGCAGAGCACTATTGCACAAGGCTCCTGGATTACACCGGTCCA |
| Intron 4-5 | 19,305,480 | 19,305,805 | 326 |
gtaagttcaattacagaaaccatct..........caacttctatgctctatatttacag
| |||
| 5 | OB02G33760.1.exon5 | 19,305,806 | 19,305,895 | 0 | 0 | 90 |
GAAAGGGAAACCGCAAAAAATATTTTGCAAGGGCTAAAAAGAGCACAATCAGCACTTCCA CTGATGGATATCGACCATTTTGCAATGTAA |
| Intron 5-6 | 19,305,896 | 19,305,895 | 0 |
| |||
| 6 | OB02G33760.1.exon6 | 19,305,896 | 19,306,666 | - | - | 771 |
ACTTGACTCACAGATAAGTTATTTAGTTGGAAAACTAAGGTGGTAAGTGAAATGTGCATA TTCTTATCTCCATTTTTATGCATTGAGGAAAGATACACATCCGTTTCAAGAGAACTGCTA TAATACAGAATACTCATGGACAAAGGGTGTTGGTTATCACTCACTCCAAACCAGGCAAGG AAAAGAAATCTATCAGGGCCACCCACCTGACGAAACTGGTACTCTTGAGTATCTCCAGTA CCAGCAGAGCAGCCACTTCCAAGCTTCATAATGTGATCCTTATCGCTTGTATCCTTGCCA GGAGGCTCCATATTGCTGGAGCTGTTGACCTTGTGTGCATCATGATCGCTTCCAGTTGCT GAAGCTTGGTAATTAGTAACACTAGGCGCCGGCATGGGGCAAAAATGAGGGTCATTGGAA TGATAAAGACCGCTAGCTCGACTATCGGCATTGCTGCTTTGCTTTCTGCTGTGTTTTGCT CCTGCGGTTTTTTTCACTTGATTGCTTTGGTCTGTGTTGCCCTCCCATGGAGTTGCTTGC ATATATAGGCATCTTGGAAGATTTGACCTGTCTGCATTCTAGATCTCATATTCTAGCTTG TCATAATTGTCGATGTTTTTCTTTACTATAATTTCAGTTTTGTCAATTTATCATGTGTCT CGGACCTATCATTTGCTTGTGGGCTGTGGCAAGGATCACTGTTGGTTGCCCCACTTGATG TAACACCATTGGAATCGTGGGATTAATTATCTTGCTAGTACGCATAGCGAC |
| 3' downstream sequence |
actatatttgtatgttccatatattaacatgtgtggtccttcagacgttt..........
|
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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