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    Oryza brachyantha (Oryza_brachyantha.v1.4b) ▼

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    Transcript: OB02G33760.1

    Location

    Chromosome 2: 19,301,493-19,306,666 forward strand.

    About this transcript

    This transcript has 6 exons and is annotated with 22 domains and features.

    Gene

    This transcript is a product of gene OB02G33760 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtFlags
    -OB02G33760.12599599aa
     
    Protein coding
    		J3LFF9 Ensembl Canonical

    Exons

    Download sequence
    Exons/ Introns
    • Translated sequence
    • Flanking sequence
    • Intron sequence
    • UTR
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    • No.
    • Exon / Intron
    • Start
    • End
    • Start Phase
    • End Phase
    • Length
    • Sequence
    Download what you seeDownload whole table
    No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
    5' upstream sequence 
    ..........tccccttccgccccttcgcagaaattcaaactcaaagcctgcgctcctcc
    1OB02G33760.1.exon119,301,49319,301,520--28 
    GGCGCCGATCTGCTCCAAGGAGGCCACC
     Intron 1-219,301,52119,301,54020 
    gcaccacccggagcaagccg
    2OB02G33760.1.exon219,301,54119,301,6290289 
    ATGGCCTCCACCAAGGAAGCCTACCGCGTCGAGCTCCGAGCTGCCGTCCGCCAGCTCGGC
GACCGCGGCCTCTACTCCGCCGCCAAATG
     Intron 2-319,301,63019,301,70879 
    gtacgcgccccccctaaaacccacc..........cgccgcctcctccccctccttgcag
    3OB02G33760.1.exon319,301,70919,302,07820370 
    GGCGGCCGAGCTGCTGGTCGGCATCGAGCCGGACGCCACACCGTCACCGTCGGTGGTGAT
GGACACCCCATCCTCGTTGGGCTCTGCCGCATCCGGCGGGCGCCTTCTGCCCCTTCGCCG
CAGCGGCGGGTCCAGCTTCCGCCGCCGCCTCCGGCCGGGCGGGGGCGCGGCCGACGCCGG
GACGCCGCTCGGCGGCGTCTCGTACGTAAGCACGCCCATCCCCGACGACGACGCGTTCGA
TGCGGGGGCTGACAAGTACCTGCTCGCCAAGACCTACTTCGACTGCCGTGAGTACCGGCG
CGCCGCTCACGTGCTGCGCGGCCAGACCGGCCGCAAGGCCGTTTTCCTTCGGTGCTATGC
CCTCTACATG
     Intron 3-419,302,07919,304,2282,150 
    gtgagtttggatggtattgcctttt..........tgatcatagttatcttctcttttag
    4OB02G33760.1.exon419,304,22919,305,479001,251 
    GCTGGAGAGAAGCGGAAAGAGGAAGAAACAGTCGAGCTTGAAGGATCTCTGGGAAAAAGC
AATGTTGTTAATCAGGAACTAGTTGCATTGGAGAGAGAGCTCTCAACACATCGGAGGACT
GGTGCTATTGATTCATTTAGTTTGTACTTGTATGGCATTGTTCTACGTGATAAAGGCAGT
GAAGCTCTAGCTAGAACAGTTCTGGTGGAATCTGTCAACAACTACCCTTGGAACTGGAGC
GCTTGGTTAGAGTTACAATATCTCTGCACTAGTAGTGATATTTTGAATAACTTAAATCTC
AAGAATCACTGGATGAAAGATTTCTTCCTTGCTAGTGCACATTTGGAATTAAAGATGCAT
GAAGAAGCTTTGAAAAGATATGAACGTTTAATGGGGGTCTTCCGTTGCAGTGACTACATT
CAGGCCCAAATAGCAACCGTGCAGTATAGCATGAGAGACCTCGATGAAGCTGACATGATT
TTTGAAGAACTCCTTAGGACCGATCCTTTCCGTGTGGATTCTATGGACGTTTACTCAAAT
TTATTGTATGCAAAAGAAAGCTCAACCGCTTTAAGTTTCCTTGCTCACAGAGTATTTTTG
ACAGATAAATATCGCCCAGAATCATGCTGCATAATCGCAAATTACTACAGTTTGAAGGGG
CAGCATGAAAAATCAGTTTTGTACTTTCAGAGGGCACTTAAGCTTAATCGAAAGTATCTT
TCAGCTTGGACTCTTATGGGACATGAGTTTGTTGAGCTAAAAAATACACCTGCTGCGATT
GATGCATACAGGCGAGCTGTTGATATAAATCCCAGAGACTATCGTGCTTGGTATGGTCTT
GGTCAGATCTATGAGATGATGGGAATGCCATTTTATGCACTTTATTACTTCCGTAAGTCA
TCATACCTACAACCTAATGATGCTCGGCTTTGGAATGCTATGGCTCAGTGCTATGAAAGC
GATCAACTTCAAATGATTGAAGATGCCATCAAGTGCTACGAGAGGTCTGCAAATAATAAT
GATACTGAAGGAATAGCACTTCACCAGCTAGCAAAGTTACATGGTATGCTTGGACAATCA
GAGGAGGCTGCATTTTACTACAAGAAGGATTTAGAGAGAATGGAAGTTGAGGAAAGGCAG
GGTCAAAATTTTGTTGAAGCTCTGCTTTTCCTTGCAAAGCATTGCAAGAGCATAGGCAGG
TTTGAGGAAGCAGAGCACTATTGCACAAGGCTCCTGGATTACACCGGTCCA
     Intron 4-519,305,48019,305,805326 
    gtaagttcaattacagaaaccatct..........caacttctatgctctatatttacag
    5OB02G33760.1.exon519,305,80619,305,8950090 
    GAAAGGGAAACCGCAAAAAATATTTTGCAAGGGCTAAAAAGAGCACAATCAGCACTTCCA
CTGATGGATATCGACCATTTTGCAATGTAA
     Intron 5-619,305,89619,305,8950 
    
      
    
      
    
    
  
    6OB02G33760.1.exon619,305,89619,306,666--771 
    
    
      
      
    
        
        
    ACTTGACTCACAGATAAGTTATTTAGTTGGAAAACTAAGGTGGTAAGTGAAATGTGCATA
TTCTTATCTCCATTTTTATGCATTGAGGAAAGATACACATCCGTTTCAAGAGAACTGCTA
TAATACAGAATACTCATGGACAAAGGGTGTTGGTTATCACTCACTCCAAACCAGGCAAGG
AAAAGAAATCTATCAGGGCCACCCACCTGACGAAACTGGTACTCTTGAGTATCTCCAGTA
CCAGCAGAGCAGCCACTTCCAAGCTTCATAATGTGATCCTTATCGCTTGTATCCTTGCCA
GGAGGCTCCATATTGCTGGAGCTGTTGACCTTGTGTGCATCATGATCGCTTCCAGTTGCT
GAAGCTTGGTAATTAGTAACACTAGGCGCCGGCATGGGGCAAAAATGAGGGTCATTGGAA
TGATAAAGACCGCTAGCTCGACTATCGGCATTGCTGCTTTGCTTTCTGCTGTGTTTTGCT
CCTGCGGTTTTTTTCACTTGATTGCTTTGGTCTGTGTTGCCCTCCCATGGAGTTGCTTGC
ATATATAGGCATCTTGGAAGATTTGACCTGTCTGCATTCTAGATCTCATATTCTAGCTTG
TCATAATTGTCGATGTTTTTCTTTACTATAATTTCAGTTTTGTCAATTTATCATGTGTCT
CGGACCTATCATTTGCTTGTGGGCTGTGGCAAGGATCACTGTTGGTTGCCCCACTTGATG
TAACACCATTGGAATCGTGGGATTAATTATCTTGCTAGTACGCATAGCGAC         

    
      
    
      
    
    
  
    3' downstream sequence 
    
    
      
      
    
        
        
    actatatttgtatgttccatatattaacatgtgtggtccttcagacgttt..........

    
      
    
      
    
    
  
    
    
    
  
      
    
        
        
        
      
    
    
    
      
    
    
  
      
    
  
        
  
      
    
    
    
  
    
  
  
  
  
  
  
  
  
  
  
    
  
  
  
    
    
  



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