Oryza brachyantha (Oryza_brachyantha.v1.4b)
Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:Projected from Arabidopsis thaliana (AT1G05350) TAIR;Acc:AT1G05350]

Location
About this transcript

This transcript has 16 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene OB02G25580 Show transcript tableHide transcript table

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-OB02G25580.11644426aa
 
Protein coding
J3LD41 Ensembl Canonical
Exons/ Introns
  • Translated sequence
  • Flanking sequence
  • Intron sequence
  • UTR
Markup
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  • No.
  • Exon / Intron
  • Start
  • End
  • Start Phase
  • End Phase
  • Length
  • Sequence
No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
5' upstream sequence
..........cgatcgagacatccatcgaaaagctcccgaccgaatctctctctctctct
1OB02G25580.1.exon112,851,49012,851,530--41
CTCTCTCCCGTTTCCATCTCCGGCGGCGGCGGCGGCGAGGA                   
 Intron 1-212,851,53112,851,56232
ctgctaggctgcgctccccaccgcaggcggcc                            
2OB02G25580.1.exon212,851,56312,851,6400078
ATGGCGGAGGAGCTACGCGCGCTGCTACGCGATCTGGACGCGCTGAAGCAGCGCCCCGAC
CCCGCCGCCATCGATCGG                                          
 Intron 2-312,851,64112,851,72888
gtaggccgctcggctgcctgcccca..........tctctctcgtggatctggttgatag
3OB02G25580.1.exon312,851,72912,851,7970069
ATGCGAGAGCGCGTGGCGGCGATGGTGAGCCCACCCGGCGCTGCTGCTGCTGCGCGTTCC
AAGATCAAG                                                   
 Intron 3-412,851,79812,851,922125
gtacgatctggtgcaggtattcggt..........gaattgggtgcggattttgctgcag
4OB02G25580.1.exon412,851,92312,852,03600114
GACATGAGCTCCGAGGTGGTGGACAGCAATCCCTACAGCAGGCTCATGGCGCTTCAGCGG
ATGGGGATCGTCGATAACTACGAGCGCATCCGTGATTACTCCGTCGCCATCGTT      
 Intron 4-512,852,03712,852,907871
gtaagcatctcttgcttggttgctc..........cttaaaatgcatttattctttgcag
5OB02G25580.1.exon512,852,90812,853,03600129
GGTATAGGTGGCGTTGGTAGTGTTGCTGCTGAGATGCTTACTAGATGTGGCATTGGTCGC
CTTTTGTTGTATGACTACGATACAGTTGAGTTGGCCAACATGAATAGGCTGTTCTTTCGC
CCAGACCAG                                                   
 Intron 5-612,853,03712,853,197161
gtaagcttcgtggcaattatgtgcc..........gtgtatatcatccttatgcaattag
6OB02G25580.1.exon612,853,19812,853,2660069
GTTGGAATGACCAAGACAGATGCTGCCGTGCAGACACTATCTGGAATAAATCCTGATGTT
ACGTTGGAG                                                   
 Intron 6-712,853,26712,853,647381
gtgagaactagtgttatcttttttc..........gatattcatatttttcttcctgcag
7OB02G25580.1.exon712,853,64812,853,79400147
AGCTATTCATTGAATATTACTACAGTGAAAGGATTTGAAACATTTTTAGGAAGTCTCAAA
GCCAGAAGCTCTGATGGGCGTAACACTGGAGTTGATCTTGTTTTGAGTTGCGTTGATAAC
TATGAAGCTCGTATGGTTGTAAACCAG                                 
 Intron 7-812,853,79512,853,923129
gtgtgaactagtcaacatttccatg..........attgttctctatacctgcttttcag
8OB02G25580.1.exon812,853,92412,853,9600137
GCATGCAATGAGCTTTGCCAGACCTGGATGGAGTCTG                       
 Intron 8-912,853,96112,854,943983
gtaagttaaaaaaactcagttcatg..........tattaatttgagtgatgtgcatcag
9OB02G25580.1.exon912,854,94412,855,0261083
GTGTCTCCGAAGATGCTGTTTCTGGTCATATACAATTGCTGGTTCCTGGTGAAACAGCAT
GTTTTGCATGTGCTCCTCCATTG                                     
 Intron 9-1012,855,02712,855,246220
gtaatttcttacgaatttgcaattt..........aacgactgtggacctctgcatatag
10OB02G25580.1.exon1012,855,24712,855,3210075
GTTGTGGCATCTGGGGTGGACGAGCGCACACTAAAGCGAGAAGGTGTTTGTGCTGCCTCT
TTGCCGACTACAATG                                             
 Intron 10-1112,855,32212,855,683362
gtaggcttctatatgtcctttagtt..........ttgctgatgtaaatgttctttgcag
11OB02G25580.1.exon1112,855,68412,855,7580075
GGTGTTGTTGCTGGTCTCCTTGTCCAGAATGCTCTGAAATATTTGTTGAAGTTTGGACAA
GTTTCCCCTTATTTG                                             
 Intron 11-1212,855,75912,856,045287
gtaattgcttaagtttaaattgtta..........cttgtgataccctctgactgcgcag
12OB02G25580.1.exon1212,856,04612,856,1320087
GGATATAATTCACTTAAGGATTACTTCCCAACAATGGAAATGAAACCAAATCCACAGTGT
TCCAATCCAGCATGTGTTCAGAGACAG                                 
 Intron 12-1312,856,13312,856,22189
gtggtcttgccccatgtgtcctctc..........tatccttattttcatcattttgtag
13OB02G25580.1.exon1312,856,22212,856,34002119
AAAGAGTATATGCAATCAAAACCTGCTAGAGATGCAGCAGCAAAAGCTAAGATGGAAGCT
GAAGCAGCAGCAGTAGCAGATGAATGTCCAGTCCATCTAGATAATGATTGGAATATTAG 
 Intron 13-1412,856,34112,857,4131,073
gtaagtcattctgcatgtgcttaat..........aacttcaatatttgttcttatccag
14OB02G25580.1.exon1412,857,41412,857,4662153
TGTTGTCGATGACAGTGACACAGCAACAGCGAGTATCCTAAGCACTGGAGCAG       
 Intron 14-1512,857,46712,857,54882
gtaattcattttgtcatggcaaact..........tgtccaaactttccaaattatacag
15OB02G25580.1.exon1512,857,54912,857,69410146
ATAGCCTCCCAGAAGGTCTTGTCCGTGAACTTCCAACTGCAGATTCCTACCAAGAACCGG
TTGTTCCAGTTACATCTGGGGCTATTGATGACGATCTTGACCTTGAGGAGCTCCAACGCC
AACTTGATGCCCTAAACTCGTCTTAA                                  
 Intron 15-1612,857,69512,857,6940

      
16OB02G25580.1.exon1612,857,69512,858,016--322
CGTTGTGAAAAATGTGGATCATCATCATTAACTTGGTTTCTCCCGAAAAGTCAATACTGG
GTTAGAAACCAAGCCAGGTTCTGCTGTCTGTGTTTACTCTGACAGAGTTACCCATTTCAC
TGGATATAGCTTCTGTCCATACCAAAGAAGTTGAAGGGTGTTAATTTAGTTACCTGTACT
GTTTTGAATTTTGGTGTACAATTTTGCATGAGTTGATGTAGATTTATGAGGCTGAAATTC
ACTGTTAACTAATGTGGAATTTTGTTAATTACCGATAAGAATTCATTCAGGAAAACTAGA
GATATTCAGAAATCTGCCCAGA                                      
3' downstream sequence
actgtgccatcatgcggtaacaacttttgacggtgctatctataaactaa..........