Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OB12G20870.1

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Description

autophagocytosis-associated family protein [Source:Projected from Arabidopsis thaliana (AT3G07525) TAIR;Acc:AT3G07525]

Location

Chromosome 12: 10,654,191-10,656,250 forward strand.

About this transcript

This transcript has 7 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OB12G20870 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	OB12G20870.1	807	268aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	J3NDM9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	51	262	-	PTHR14957	-
Gene3D	104	253	-	3.30.1460.50	-
Pfam	62	258	Ubiquitin-like-conjugating enzyme Atg3/Atg10	PF03987	IPR007135 [Display all genes with this domain]

Other features

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Feature type
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Filter

Feature type	Start	End
Seg	145	158
Alphafold	1	268

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