Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OB11G11540.1

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Location

Chromosome 11: 919,990-921,981 reverse strand.

About this transcript

This transcript has 1 exon and is annotated with 22 domains and features.

Gene

This transcript is a product of gene OB11G11540 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OB11G11540.1	1992	663aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	J3N5R8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PROSITE profiles	15	663	Histone H3-K9 methyltransferase, plant	PS51575	IPR025794 [Display all genes with this domain]
PANTHER	80	659	Histone-lysine N-methyltransferase SUVAR3-9	PTHR45660	IPR051357 [Display all genes with this domain]
Superfamily	187	372	PUA-like superfamily	SSF88697	IPR015947 [Display all genes with this domain]
SMART	377	471	Pre-SET domain	SM00468	IPR007728 [Display all genes with this domain]
Pfam	382	479	Pre-SET domain	PF05033	IPR007728 [Display all genes with this domain]
PROSITE profiles	423	484	Pre-SET domain	PS50867	IPR007728 [Display all genes with this domain]
PROSITE profiles	487	631	SET domain	PS50280	IPR001214 [Display all genes with this domain]
SMART	487	637	SET domain	SM00317	IPR001214 [Display all genes with this domain]
Pfam	498	631	SET domain	PF00856	IPR001214 [Display all genes with this domain]
Superfamily	362	642	SET domain superfamily	SSF82199	IPR046341 [Display all genes with this domain]
Gene3D	370	663	SET domain superfamily	2.170.270.10	IPR046341 [Display all genes with this domain]
SMART	200	352	SRA-YDG	SM00466	IPR003105 [Display all genes with this domain]
Pfam	204	352	SRA-YDG	PF02182	IPR003105 [Display all genes with this domain]
PROSITE profiles	205	348	SRA-YDG	PS51015	IPR003105 [Display all genes with this domain]
Gene3D	188	369	SRA-YDG superfamily	2.30.280.10	IPR036987 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	50	74
MobiDBLite	87	132
MobiDBLite	98	109
Seg	7	20
Seg	52	65
Seg	105	119
Alphafold	1	663

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