Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Transcript: OB09G14880.1

.

Description

DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 [Source:Projected from Arabidopsis thaliana (AT2G19430) TAIR;Acc:AT2G19430]

Location

Chromosome 9: 5,904,120-5,907,546 reverse strand.

About this transcript

This transcript has 13 exons and is annotated with 18 domains and features.

Gene

This transcript is a product of gene OB09G14880 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	OB09G14880.1	1325	374aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	J3MWV9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

.

Domains & features

.

Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PROSITE profiles	199	236	-	PS50294	-
PANTHER	1	369	THO complex subunit 6	PTHR44411	IPR042626 [Display all genes with this domain]
SMART	81	122	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
Pfam	84	121	WD40 repeat	PF00400	IPR001680 [Display all genes with this domain]
PROSITE profiles	88	121	WD40 repeat	PS50082	IPR001680 [Display all genes with this domain]
SMART	192	231	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
Pfam	193	231	WD40 repeat	PF00400	IPR001680 [Display all genes with this domain]
PROSITE profiles	199	240	WD40 repeat	PS50082	IPR001680 [Display all genes with this domain]
SMART	234	278	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
Pfam	249	278	WD40 repeat	PF00400	IPR001680 [Display all genes with this domain]
SMART	319	357	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
PROSITE patterns	218	232	WD40 repeat, conserved site	PS00678	IPR019775 [Display all genes with this domain]
Superfamily	44	343	WD40-repeat-containing domain superfamily	SSF50978	IPR036322 [Display all genes with this domain]
Gene3D	22	148	WD40/YVTN repeat-like-containing domain superfamily	2.130.10.10	IPR015943 [Display all genes with this domain]
Gene3D	149	370	WD40/YVTN repeat-like-containing domain superfamily	2.130.10.10	IPR015943 [Display all genes with this domain]

Other features

Show/hide columns

Feature type
Start
End

Download what you see Download whole table

Filter

Feature type	Start	End
Seg	44	72
Seg	112	123
Alphafold	1	374

.

Personal Data