Oryza brachyantha (Oryza_brachyantha.v1.4b) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 8: 2,694,758-2,696,242 reverse strand.
This transcript has 1 exon and is annotated with 26 domains and features.
This transcript is a product of gene OB08G14040 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| Superfamily | 262 | 315 | - | SSF57850 | - |
| CDD | 266 | 310 | - | cd16745 | - |
| PANTHER | 227 | 455 | E3 ubiquitin-protein ligase RNF5/RNF185-like | PTHR12313 | IPR045103 [Display all genes with this domain] |
| Pfam | 268 | 308 | Zinc finger, C3HC4 RING-type | PF00097 | IPR018957 [Display all genes with this domain] |
| SMART | 268 | 308 | Zinc finger, RING-type | SM00184 | IPR001841 [Display all genes with this domain] |
| PROSITE profiles | 268 | 309 | Zinc finger, RING-type | PS50089 | IPR001841 [Display all genes with this domain] |
| PROSITE patterns | 283 | 292 | Zinc finger, RING-type, conserved site | PS00518 | IPR017907 [Display all genes with this domain] |
| Gene3D | 246 | 365 | Zinc finger, RING/FYVE/PHD-type | 3.30.40.10 | IPR013083 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| MobiDBLite | 1 | 60 |
| MobiDBLite | 9 | 23 |
| MobiDBLite | 35 | 49 |
| MobiDBLite | 192 | 254 |
| MobiDBLite | 218 | 232 |
| MobiDBLite | 233 | 254 |
| MobiDBLite | 332 | 351 |
| MobiDBLite | 377 | 494 |
| MobiDBLite | 403 | 425 |
| MobiDBLite | 445 | 466 |
| Seg | 3 | 16 |
| Seg | 51 | 74 |
| Seg | 110 | 121 |
| Seg | 157 | 178 |
| Seg | 386 | 404 |
| Seg | 429 | 463 |
| Seg | 474 | 492 |
| Alphafold | 1 | 494 |
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Ensembl Plants release 60 - October 2024 © EMBL-EBI EMBL-EBI
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