Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OB06G31940.1

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Location

Chromosome 6: 19,041,004-19,044,500 reverse strand.

About this transcript

This transcript has 3 exons and is annotated with 15 domains and features.

Gene

This transcript is a product of gene OB06G31940 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OB06G31940.1	1056	351aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	J3MGQ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Superfamily	17	146	-	SSF49599	-
CDD	162	279	-	cd18280	-
Gene3D	283	351	-	1.25.40.420	-
Pfam	287	343	-	PF24570	-
PANTHER	14	343	BTB/POZ and MATH domain-containing protein 1-6	PTHR26379	IPR045005 [Display all genes with this domain]
Pfam	163	279	BTB/POZ domain	PF00651	IPR000210 [Display all genes with this domain]
PROSITE profiles	173	240	BTB/POZ domain	PS50097	IPR000210 [Display all genes with this domain]
SMART	173	283	BTB/POZ domain	SM00225	IPR000210 [Display all genes with this domain]
Pfam	18	141	MATH/TRAF domain	PF22486	IPR002083 [Display all genes with this domain]
CDD	18	142	MATH/TRAF domain	cd00121	IPR002083 [Display all genes with this domain]
Gene3D	151	277	SKP1/BTB/POZ domain superfamily	3.30.710.10	IPR011333 [Display all genes with this domain]
Superfamily	157	280	SKP1/BTB/POZ domain superfamily	SSF54695	IPR011333 [Display all genes with this domain]
Gene3D	16	146	TRAF-like	2.60.210.10	IPR008974 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
Seg	241	254
Alphafold	1	351

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