Oryza brachyantha (Oryza_brachyantha.v1.4b)
Location
About this transcript

This transcript has 6 exons and is annotated with 23 domains and features.

Gene

This transcript is a product of gene OB05G24700 Show transcript tableHide transcript table

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
-OB05G24700.11234236aa
 
Protein coding
J3M796 -Ensembl Canonical

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
PANTHER6235AlfinPTHR12321IPR045104 [Display all genes with this domain]
Pfam5118Alfin, N-terminalPF12165IPR021998 [Display all genes with this domain]
CDD182232Alfin1-like, PHD fingercd15613IPR044104 [Display all genes with this domain]
Superfamily172232Zinc finger, FYVE/PHD-typeSSF57903IPR011011 [Display all genes with this domain]
PROSITE profiles180232Zinc finger, PHD-fingerPS50016IPR019787 [Display all genes with this domain]
Pfam183229Zinc finger, PHD-fingerPF00628IPR019787 [Display all genes with this domain]
SMART182230Zinc finger, PHD-typeSM00249IPR001965 [Display all genes with this domain]
PROSITE patterns183229Zinc finger, PHD-type, conserved sitePS01359IPR019786 [Display all genes with this domain]
Gene3D172231Zinc finger, RING/FYVE/PHD-type3.30.40.10IPR013083 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite121183
MobiDBLite130144
MobiDBLite162178
Phobius12
Phobius112
Phobius38
Phobius912
Phobius1369
Phobius7091
Phobius92236
Seg4355
Seg128149
Seg152179
Alphafold1236