Transcript: OB04G36040.1

Description

SEC-C motif-containing protein / OTU-like cysteine protease family protein [Source:Projected from Arabidopsis thaliana (AT5G67170) TAIR;Acc:AT5G67170]

Location

Chromosome 4: 20,301,228-20,305,614 reverse strand.

About this transcript

This transcript has 12 exons and is annotated with 15 domains and features.

Gene

This transcript is a product of gene OB04G36040 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	OB04G36040.1	1802	456aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	J3M2H9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	93	233	-	3.90.70.80	-
CDD	107	231	-	cd22771	-
PROSITE profiles	108	233	OTU domain	PS50802	IPR003323 [Display all genes with this domain]
Pfam	115	227	OTU domain	PF02338	IPR003323 [Display all genes with this domain]
PANTHER	85	249	OTU domain-containing ubiquitin thioesterase	PTHR12419	IPR050704 [Display all genes with this domain]
Superfamily	84	231	Papain-like cysteine peptidase superfamily	SSF54001	IPR038765 [Display all genes with this domain]

Feature type	Start	End
MobiDBLite	30	50
MobiDBLite	351	456
MobiDBLite	369	389
Seg	11	28
Seg	34	52
Seg	69	82
Seg	368	385
Seg	417	432
Alphafold	1	456

Domains & features

Domains

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