Oryza brachyantha (Oryza_brachyantha.v1.4b) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 3: 3,094,670-3,098,940 forward strand.
This transcript has 7 exons and is annotated with 21 domains and features.
This transcript is a product of gene OB03G15100 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| Gene3D | 28 | 158 | - | 3.50.30.30 | - |
| Superfamily | 83 | 147 | - | SSF52025 | - |
| Superfamily | 216 | 290 | - | SSF57850 | - |
| PANTHER | 45 | 297 | E3 ubiquitin-protein ligase and sorting receptor | PTHR47168 | IPR051653 [Display all genes with this domain] |
| Pfam | 59 | 143 | PA domain | PF02225 | IPR003137 [Display all genes with this domain] |
| CDD | 17 | 165 | ZNRF4 /RNF13/RNF167, PA domain | cd02123 | IPR044744 [Display all genes with this domain] |
| Pfam | 235 | 278 | Zinc finger, RING-type | PF13639 | IPR001841 [Display all genes with this domain] |
| SMART | 236 | 277 | Zinc finger, RING-type | SM00184 | IPR001841 [Display all genes with this domain] |
| PROSITE profiles | 236 | 278 | Zinc finger, RING-type | PS50089 | IPR001841 [Display all genes with this domain] |
| Gene3D | 197 | 283 | Zinc finger, RING/FYVE/PHD-type | 3.30.40.10 | IPR013083 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| MobiDBLite | 309 | 329 |
| MobiDBLite | 364 | 387 |
| Seg | 189 | 202 |
| Seg | 304 | 338 |
| Seg | 369 | 380 |
| Seg | 416 | 435 |
| Seg | 516 | 531 |
| SignalP | 1 | 26 |
| TMHMM | 7 | 29 |
| TMHMM | 166 | 188 |
| Alphafold | 1 | 534 |
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Ensembl Plants release 60 - October 2024 © EMBL-EBI EMBL-EBI
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