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    Oryza brachyantha (Oryza_brachyantha.v1.4b) ▼

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    Transcript: OB02G17560.1

    Description

    Coatomer subunit beta' [Source:UniProtKB/TrEMBL;Acc:J3LAT9]

    Location

    Chromosome 2: 4,943,675-4,963,940 reverse strand.

    About this transcript

    This transcript has 28 exons and is annotated with 37 domains and features.

    Gene

    This transcript is a product of gene OB02G17560 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • RefSeq
    • Flags
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    NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
    -OB02G17560.13341905aa
     
    Protein coding
    		J3LAT9 -Ensembl Canonical

    Domains & features

    Domains

    Show/hide columns
    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
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    Domain sourceStartEndDescriptionAccessionInterPro
    CDD17297-cd00200-
    PROSITE profiles95127-PS50294-
    PROSITE profiles138172-PS50294-
    PROSITE profiles181218-PS50294-
    PROSITE profiles225256-PS50294-
    CDD304778-cd22947-
    Gene3D590798-1.25.40.470-
    PIRSF2883Coatomer beta' subunit (COPB2)PIRSF005567IPR016453 [Display all genes with this domain]
    PANTHER2717Coatomer complex subunitPTHR19876IPR050844 [Display all genes with this domain]
    Pfam319763Coatomer, WD associated regionPF04053IPR006692 [Display all genes with this domain]
    Prints158172G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints202216G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints244258G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    SMART443WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    PROSITE profiles1152WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    Pfam1643WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    SMART4685WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART88127WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam91127WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles95127WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART131171WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam133171WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles138180WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART174215WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam177215WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles181224WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART218257WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam220256WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles225266WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    Superfamily4297WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
    Superfamily227494WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
    Gene3D11300WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

    Other features

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    • Feature type
    • Start
    • End
    Download what you seeDownload whole table
    Feature typeStartEnd
    MobiDBLite849873
    MobiDBLite852873
    Seg502512
    Seg695709
    Alphafold1905

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