Oryza brachyantha (Oryza_brachyantha.v1.4b) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 1: 31,293,859-31,296,742 forward strand.
This transcript has 6 exons and is annotated with 12 domains and features.
This transcript is a product of gene OB01G50750 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| Superfamily | 229 | 279 | - | SSF57850 | - |
| Pfam | 234 | 272 | - | PF13923 | - |
| PANTHER | 51 | 287 | E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8 | PTHR47094 | IPR049627 [Display all genes with this domain] |
| SMART | 235 | 272 | Zinc finger, RING-type | SM00184 | IPR001841 [Display all genes with this domain] |
| PROSITE profiles | 235 | 273 | Zinc finger, RING-type | PS50089 | IPR001841 [Display all genes with this domain] |
| PROSITE patterns | 250 | 259 | Zinc finger, RING-type, conserved site | PS00518 | IPR017907 [Display all genes with this domain] |
| Gene3D | 222 | 287 | Zinc finger, RING/FYVE/PHD-type | 3.30.40.10 | IPR013083 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| MobiDBLite | 146 | 155 |
| MobiDBLite | 146 | 177 |
| Seg | 131 | 142 |
| Seg | 221 | 232 |
| Alphafold | 1 | 290 |
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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