Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OB01G48300.1

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Location

Chromosome 1: 29,770,612-29,771,375 forward strand.

About this transcript

This transcript has 2 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene OB01G48300 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OB01G48300.1	603	200aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	J3L6H4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	4	97	-	2.30.30.1150	-
PANTHER	52	143	-	PTHR47162	-
Superfamily	32	98	Zinc finger, FYVE/PHD-type	SSF57903	IPR011011 [Display all genes with this domain]
Superfamily	99	144	Zinc finger, FYVE/PHD-type	SSF57903	IPR011011 [Display all genes with this domain]
PROSITE profiles	89	144	Zinc finger, PHD-finger	PS50016	IPR019787 [Display all genes with this domain]
Pfam	99	141	Zinc finger, PHD-finger	PF00628	IPR019787 [Display all genes with this domain]
SMART	42	96	Zinc finger, PHD-type	SM00249	IPR001965 [Display all genes with this domain]
SMART	99	142	Zinc finger, PHD-type	SM00249	IPR001965 [Display all genes with this domain]
PROSITE patterns	43	115	Zinc finger, PHD-type, conserved site	PS01359	IPR019786 [Display all genes with this domain]
PROSITE patterns	92	141	Zinc finger, PHD-type, conserved site	PS01359	IPR019786 [Display all genes with this domain]
Gene3D	98	144	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
Alphafold	1	200

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